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BioC 3.2: BUILD BIN report for ChIPpeakAnno on windows1.bioconductor.org

This page was generated on 2015-10-27 17:28:56 -0400 (Tue, 27 Oct 2015).

Package 165/1104HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ChIPpeakAnno 3.4.0
Lihua Julie Zhu , Jianhong Ou
Snapshot Date: 2015-10-26 19:24:07 -0400 (Mon, 26 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/ChIPpeakAnno
Last Changed Rev: 109589 / Revision: 109947
Last Changed Date: 2015-10-13 15:36:05 -0400 (Tue, 13 Oct 2015)
linux1.bioconductor.org Linux (Ubuntu 14.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
windows1.bioconductor.org Windows Server 2012 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: ChIPpeakAnno
Version: 3.4.0
Command: cd ChIPpeakAnno.buildbin-libdir/ChIPpeakAnno && zip -r ../../ChIPpeakAnno_3.4.0.zip . & cd ../..
StartedAt: 2015-10-27 07:06:30 -0400 (Tue, 27 Oct 2015)
EndedAt: 2015-10-27 07:06:46 -0400 (Tue, 27 Oct 2015)
EllapsedTime: 16.3 seconds
RetCode: 0
Status:  OK  
PackageFile: ChIPpeakAnno_3.4.0.zip
PackageFileSize: 31.28 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   cd ChIPpeakAnno.buildbin-libdir/ChIPpeakAnno && zip -r ../../ChIPpeakAnno_3.4.0.zip . & cd ../..
###
##############################################################################
##############################################################################


  adding: CITATION (188 bytes security) (deflated 58%)
  adding: data/ (208 bytes security) (stored 0%)
  adding: data/annotatedPeak.rda (188 bytes security) (deflated 0%)
  adding: data/datalist (188 bytes security) (deflated 45%)
  adding: data/enrichedGO.rda (188 bytes security) (stored 0%)
  adding: data/ExonPlusUtr.human.GRCh37.rda (188 bytes security) (deflated 0%)
  adding: data/HOT.spots.rda (188 bytes security) (deflated 0%)
  adding: data/myPeakList.rda (188 bytes security) (deflated 0%)
  adding: data/Peaks.Ste12.Replicate1.rda (188 bytes security) (stored 0%)
  adding: data/Peaks.Ste12.Replicate2.rda (188 bytes security) (stored 0%)
  adding: data/Peaks.Ste12.Replicate3.rda (188 bytes security) (stored 0%)
  adding: data/TSS.human.GRCh37.rda (188 bytes security) (deflated 0%)
  adding: data/TSS.human.GRCh38.rda (188 bytes security) (deflated 0%)
  adding: data/TSS.human.NCBI36.rda (188 bytes security) (deflated 0%)
  adding: data/TSS.mouse.GRCm38.rda (188 bytes security) (deflated 0%)
  adding: data/TSS.mouse.NCBIM37.rda (188 bytes security) (deflated 0%)
  adding: data/TSS.rat.RGSC3.4.rda (188 bytes security) (deflated 0%)
  adding: data/TSS.rat.Rnor_5.0.rda (188 bytes security) (deflated 0%)
  adding: data/TSS.zebrafish.Zv8.rda (188 bytes security) (deflated 0%)
  adding: data/TSS.zebrafish.Zv9.rda (188 bytes security) (deflated 0%)
  adding: data/wgEncodeTfbsV3.rda (188 bytes security) (deflated 0%)
  adding: DESCRIPTION (188 bytes security) (deflated 47%)
  adding: doc/ (208 bytes security) (stored 0%)
  adding: doc/ChIPpeakAnno.html (188 bytes security) (deflated 50%)
  adding: doc/ChIPpeakAnno.Rmd (188 bytes security) (deflated 69%)
  adding: doc/index.html (188 bytes security) (deflated 59%)
  adding: extdata/ (208 bytes security) (stored 0%)
  adding: extdata/annotatedPeaks.2.10.0.rds (188 bytes security) (deflated 1%)
  adding: extdata/examplePattern.fa (188 bytes security) (deflated 24%)
  adding: extdata/gadem.rda (188 bytes security) (deflated 4%)
  adding: extdata/GFF_peaks.gff (188 bytes security) (deflated 76%)
  adding: extdata/GSM700906_AA86_vs_INPUT_WS170.bed (188 bytes security) (deflated 62%)
  adding: extdata/GSM700907_DAF-12_TAP_vs_INPUT_#1_WS170.bed (188 bytes security) (deflated 63%)
  adding: extdata/GSM700908_DAF-12_TAP_vs_INPUT_#2_WS170.bed (188 bytes security) (deflated 63%)
  adding: extdata/GSM700909_DAF-12_TAP_vs_INPUT_#3_WS170.bed (188 bytes security) (deflated 63%)
  adding: extdata/guide-seq-peaks.txt (188 bytes security) (deflated 78%)
  adding: extdata/MACS2_peaks.xls (188 bytes security) (deflated 69%)
  adding: extdata/MACS_output.bed (188 bytes security) (deflated 65%)
  adding: extdata/MACS_peaks.xls (188 bytes security) (deflated 48%)
  adding: extdata/peaks.narrowPeak (188 bytes security) (deflated 66%)
  adding: extdata/peaks_hg19.bed (188 bytes security) (deflated 63%)
  adding: extdata/ref.gtf (188 bytes security) (deflated 33%)
  adding: extdata/TAF.bigWig (188 bytes security) (deflated 32%)
  adding: extdata/TAF.broadPeak (188 bytes security) (deflated 65%)
  adding: extdata/Tead4.bigWig (188 bytes security) (deflated 44%)
  adding: extdata/Tead4.broadPeak (188 bytes security) (deflated 66%)
  adding: extdata/test.bed (188 bytes security) (deflated 12%)
  adding: extdata/WS220.bed (188 bytes security) (deflated 76%)
  adding: extdata/YY1.bigWig (188 bytes security) (deflated 32%)
  adding: extdata/YY1.broadPeak (188 bytes security) (deflated 66%)
  adding: help/ (208 bytes security) (stored 0%)
  adding: help/aliases.rds (188 bytes security) (stored 0%)
  adding: help/AnIndex (188 bytes security) (deflated 69%)
  adding: help/ChIPpeakAnno.rdb (188 bytes security) (deflated 1%)
  adding: help/ChIPpeakAnno.rdx (188 bytes security) (stored 0%)
  adding: help/paths.rds (188 bytes security) (stored 0%)
  adding: html/ (208 bytes security) (stored 0%)
  adding: html/00Index.html (188 bytes security) (deflated 78%)
  adding: html/R.css (188 bytes security) (deflated 75%)
  adding: INDEX (188 bytes security) (deflated 69%)
  adding: MD5 (188 bytes security) (deflated 48%)
  adding: Meta/ (208 bytes security) (stored 0%)
  adding: Meta/data.rds (188 bytes security) (stored 0%)
  adding: Meta/hsearch.rds (188 bytes security) (deflated 1%)
  adding: Meta/links.rds (188 bytes security) (stored 0%)
  adding: Meta/nsInfo.rds (188 bytes security) (stored 0%)
  adding: Meta/package.rds (188 bytes security) (stored 0%)
  adding: Meta/Rd.rds (188 bytes security) (stored 0%)
  adding: Meta/vignette.rds (188 bytes security) (stored 0%)
  adding: NAMESPACE (188 bytes security) (deflated 58%)
  adding: NEWS (188 bytes security) (deflated 66%)
  adding: R/ (208 bytes security) (stored 0%)
  adding: R/ChIPpeakAnno (188 bytes security) (deflated 41%)
  adding: R/ChIPpeakAnno.rdb (188 bytes security) (deflated 26%)
  adding: R/ChIPpeakAnno.rdx (188 bytes security) (stored 0%)
  adding: unitTests/ (208 bytes security) (stored 0%)
  adding: unitTests/test_addGeneIDs.R (188 bytes security) (deflated 37%)
  adding: unitTests/test_annotatePeakInBatch.R (188 bytes security) (deflated 84%)
  adding: unitTests/test_assignChromosomeRegion.R (188 bytes security) (deflated 71%)
  adding: unitTests/test_binOverFeature.R (188 bytes security) (deflated 72%)
  adding: unitTests/test_feature.R (188 bytes security) (deflated 70%)
  adding: unitTests/test_findOverlapsOfPeaks.R (188 bytes security) (deflated 74%)
  adding: unitTests/test_getAllPeakSequence.R (188 bytes security) (deflated 72%)
  adding: unitTests/test_getAnnotation.R (188 bytes security) (deflated 31%)
  adding: unitTests/test_getVennCounts.R (188 bytes security) (deflated 78%)
  adding: unitTests/test_makeVennDiagram.R (188 bytes security) (deflated 89%)
  adding: unitTests/test_peaksNearBDP.R (188 bytes security) (deflated 69%)
  adding: unitTests/test_toGRanges.R (188 bytes security) (deflated 66%)
  adding: unitTests/test_write2FASTA.R (188 bytes security) (deflated 61%)