Back to Multiple platform build/check report for BioC 3.19:   simplified   long
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This page was generated on 2024-10-18 20:42 -0400 (Fri, 18 Oct 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_644.4.1 (2024-06-14) -- "Race for Your Life" 4763
palomino7Windows Server 2022 Datacenterx644.4.1 (2024-06-14 ucrt) -- "Race for Your Life" 4500
merida1macOS 12.7.5 Montereyx86_644.4.1 (2024-06-14) -- "Race for Your Life" 4530
kjohnson1macOS 13.6.6 Venturaarm644.4.1 (2024-06-14) -- "Race for Your Life" 4480
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 908/2300HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
graper 1.20.0  (landing page)
Britta Velten
Snapshot Date: 2024-10-16 14:00 -0400 (Wed, 16 Oct 2024)
git_url: https://git.bioconductor.org/packages/graper
git_branch: RELEASE_3_19
git_last_commit: a4dfa52
git_last_commit_date: 2024-04-30 11:11:42 -0400 (Tue, 30 Apr 2024)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino7Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published


CHECK results for graper on kjohnson1

To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: graper
Version: 1.20.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.20.0.tar.gz
StartedAt: 2024-10-17 23:49:55 -0400 (Thu, 17 Oct 2024)
EndedAt: 2024-10-17 23:51:08 -0400 (Thu, 17 Oct 2024)
EllapsedTime: 72.8 seconds
RetCode: 0
Status:   WARNINGS  
CheckDir: graper.Rcheck
Warnings: 1

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.20.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/Users/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck’
* using R version 4.4.1 (2024-06-14)
* using platform: aarch64-apple-darwin20
* R was compiled by
    Apple clang version 14.0.0 (clang-1400.0.29.202)
    GNU Fortran (GCC) 12.2.0
* running under: macOS Ventura 13.6.6
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.20.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... WARNING
Found the following significant warnings:
  /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/tools/config.hpp:23:6: warning: "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-W#warnings]
  #    warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
See ‘/Users/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck/00install.out’ for details.
* used C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.0.40.1)’
* used SDK: ‘MacOSX11.3.sdk’
* checking C++ specification ... NOTE
  Specified C++11: please drop specification unless essential
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 WARNING, 3 NOTEs
See
  ‘/Users/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck/00check.log’
for details.


Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library’
* installing *source* package ‘graper’ ...
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.0.40.1)’
using C++11
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c RcppExports.cpp -o RcppExports.o
clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c fit_graper.cpp -o fit_graper.o
In file included from fit_graper.cpp:4:
In file included from ./graper_linear_dense_ff.h:2:
In file included from /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/special_functions/digamma.hpp:15:
In file included from /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/special_functions/math_fwd.hpp:29:
In file included from /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/special_functions/detail/round_fwd.hpp:11:
/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/tools/config.hpp:23:6: warning: "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-W#warnings]
#    warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
     ^
1 warning generated.
clang++ -arch arm64 -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lemutls_w -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R version 4.4.1 (2024-06-14) -- "Race for Your Life"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin20

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-867.751
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-563.593
ELB improved by 304.157

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-504.818
ELB improved by 58.7749

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-473.366
ELB improved by 31.4526

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.401
ELB improved by 12.9649

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.479
ELB improved by 5.92171

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.399
ELB improved by 4.08007

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.719
ELB improved by 3.67964

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.034
ELB improved by 3.68524

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.252
ELB improved by 3.78231

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.509
ELB improved by 3.74289

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.076
ELB improved by 3.43254

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.196
ELB improved by 2.88019

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.964
ELB improved by 2.23266

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.324
ELB improved by 1.63967

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.146
ELB improved by 1.17744

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.299
ELB improved by 0.847821

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.676
ELB improved by 0.62275

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.203
ELB improved by 0.472679

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.83
ELB improved by 0.373289

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.523
ELB improved by 0.306603

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.263
ELB improved by 0.260658

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.035
ELB improved by 0.228058

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.83
ELB improved by 0.204365

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.643
ELB improved by 0.186901

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.469
ELB improved by 0.174007

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.305
ELB improved by 0.164617

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.147
ELB improved by 0.158016

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.993
ELB improved by 0.153716

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.842
ELB improved by 0.15138

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.691
ELB improved by 0.150789

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.539
ELB improved by 0.151824

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.384
ELB improved by 0.154475

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.226
ELB improved by 0.158857

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.06
ELB improved by 0.165268

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.886
ELB improved by 0.174279

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.699
ELB improved by 0.186895

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.494
ELB improved by 0.204814

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.264
ELB improved by 0.230784

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.995
ELB improved by 0.26877

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.672
ELB improved by 0.322864

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.279
ELB improved by 0.392964

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.809
ELB improved by 0.469484

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.27
ELB improved by 0.539282

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.67
ELB improved by 0.599879

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.014
ELB improved by 0.656136

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.306
ELB improved by 0.708417

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.555
ELB improved by 0.750888

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.78
ELB improved by 0.774643

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.009
ELB improved by 0.771081

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.274
ELB improved by 0.735389

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.605
ELB improved by 0.669032

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.025
ELB improved by 0.579934

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.544
ELB improved by 0.480333

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.161
ELB improved by 0.383228

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.863
ELB improved by 0.298723

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.63
ELB improved by 0.232208

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.445
ELB improved by 0.185282

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.287
ELB improved by 0.158298

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.134
ELB improved by 0.153027

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.96
ELB improved by 0.174217

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.733
ELB improved by 0.226712

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.43
ELB improved by 0.302574

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.058
ELB improved by 0.371755

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.651
ELB improved by 0.407807

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.26
ELB improved by 0.390519

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.957
ELB improved by 0.30265

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.758
ELB improved by 0.199731

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.628
ELB improved by 0.129773

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.541
ELB improved by 0.0871627

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.481
ELB improved by 0.0599717

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.438
ELB improved by 0.0423883

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.407
ELB improved by 0.0311557

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.383
ELB improved by 0.0239708

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.364
ELB improved by 0.0192557

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.348
ELB improved by 0.0160231

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.334
ELB improved by 0.0136917

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.322
ELB improved by 0.0119284

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.312
ELB improved by 0.010542

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.302
ELB improved by 0.00942007

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-921.843
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-586.375
ELB improved by 335.468

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-527.976
ELB improved by 58.399

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-494.108
ELB improved by 33.8682

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-480.014
ELB improved by 14.0937

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-474.022
ELB improved by 5.99195

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.244
ELB improved by 3.77856

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.204
ELB improved by 3.04007

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.478
ELB improved by 2.72518

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.939
ELB improved by 2.5395

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.556
ELB improved by 2.38281

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.339
ELB improved by 2.21718

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.314
ELB improved by 2.02543

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.509
ELB improved by 1.80437

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.946
ELB improved by 1.56329

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.628
ELB improved by 1.31833

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.542
ELB improved by 1.0857

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.664
ELB improved by 0.877521

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.964
ELB improved by 0.700587

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.407
ELB improved by 0.556598

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.964
ELB improved by 0.443305

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.608
ELB improved by 0.356166

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.318
ELB improved by 0.289935

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.078
ELB improved by 0.239729

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.876
ELB improved by 0.201499

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.704
ELB improved by 0.172105

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.555
ELB improved by 0.149209

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.424
ELB improved by 0.131111

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.307
ELB improved by 0.116593

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.203
ELB improved by 0.104785

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.108
ELB improved by 0.0950668

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.021
ELB improved by 0.0869907

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.94
ELB improved by 0.0802304

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.866
ELB improved by 0.0745441

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.796
ELB improved by 0.0697501

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.73
ELB improved by 0.0657098

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.668
ELB improved by 0.0623158

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.609
ELB improved by 0.0594846

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.551
ELB improved by 0.0571499

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.496
ELB improved by 0.0552594

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.442
ELB improved by 0.0537712

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.39
ELB improved by 0.0526516

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.338
ELB improved by 0.0518731

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.286
ELB improved by 0.0514131

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.235
ELB improved by 0.0512517

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.184
ELB improved by 0.0513703

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.132
ELB improved by 0.0517503

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.08
ELB improved by 0.0523703

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.027
ELB improved by 0.0532046

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.972
ELB improved by 0.0542207

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.917
ELB improved by 0.0553774

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.86
ELB improved by 0.0566231

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.802
ELB improved by 0.0578961

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.743
ELB improved by 0.0591265

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.683
ELB improved by 0.0602405

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.622
ELB improved by 0.061167

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.56
ELB improved by 0.0618457

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.498
ELB improved by 0.0622329

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.435
ELB improved by 0.0623061

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.373
ELB improved by 0.0620633

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.312
ELB improved by 0.06152

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.251
ELB improved by 0.0607037

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.192
ELB improved by 0.0596496

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.133
ELB improved by 0.0583972

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.076
ELB improved by 0.0569884

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.021
ELB improved by 0.0554665

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.967
ELB improved by 0.0538754

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.915
ELB improved by 0.0522584

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.864
ELB improved by 0.0506575

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.815
ELB improved by 0.0491119

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.767
ELB improved by 0.0476574

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.721
ELB improved by 0.0463262

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.676
ELB improved by 0.0451464

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.632
ELB improved by 0.0441427

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.588
ELB improved by 0.0433368

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.545
ELB improved by 0.0427486

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.503
ELB improved by 0.0423971

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.461
ELB improved by 0.0423014

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.418
ELB improved by 0.0424823

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.375
ELB improved by 0.042963

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.332
ELB improved by 0.043771

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.287
ELB improved by 0.0449388

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.24
ELB improved by 0.046506

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.192
ELB improved by 0.0485207

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.141
ELB improved by 0.0510407

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.086
ELB improved by 0.0541359

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.028
ELB improved by 0.0578893

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.966
ELB improved by 0.0623985

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.898
ELB improved by 0.0677764

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.824
ELB improved by 0.07415

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.743
ELB improved by 0.0816571

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.652
ELB improved by 0.0904386

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.551
ELB improved by 0.100624

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.439
ELB improved by 0.112308

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.314
ELB improved by 0.125516

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.173
ELB improved by 0.140157

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.017
ELB improved by 0.155966

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.845
ELB improved by 0.172449

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.656
ELB improved by 0.188853

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.452
ELB improved by 0.204176

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.235
ELB improved by 0.217256

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.008
ELB improved by 0.226935

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.776
ELB improved by 0.232259

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.543
ELB improved by 0.232658

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.315
ELB improved by 0.228014

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.096
ELB improved by 0.218636

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.891
ELB improved by 0.205191

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.702
ELB improved by 0.188678

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.532
ELB improved by 0.170394

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.38
ELB improved by 0.151756

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.246
ELB improved by 0.133976

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.128
ELB improved by 0.117783

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.025
ELB improved by 0.103357

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.935
ELB improved by 0.0904918

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.856
ELB improved by 0.0788496

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.788
ELB improved by 0.0681735

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.729
ELB improved by 0.0583774

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.68
ELB improved by 0.0495104

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.638
ELB improved by 0.0416652

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.603
ELB improved by 0.0348972

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.574
ELB improved by 0.0291917

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.55
ELB improved by 0.02447

iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.529
ELB improved by 0.020615

iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.511
ELB improved by 0.0174963

iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.496
ELB improved by 0.014989

iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.483
ELB improved by 0.0129819

iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.472
ELB improved by 0.0113815

iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.462
ELB improved by 0.0101112

iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.453
ELB improved by 0.00910951

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-869.582
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-582.676
ELB improved by 286.906

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-520.787
ELB improved by 61.8888

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-479.614
ELB improved by 41.1734

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.945
ELB improved by 19.669

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.82
ELB improved by 8.12492

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.407
ELB improved by 5.41283

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.408
ELB improved by 4.99894

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.402
ELB improved by 5.00568

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.262
ELB improved by 5.14052

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.067
ELB improved by 5.19486

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.088
ELB improved by 4.97947

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.656
ELB improved by 4.43169

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.008
ELB improved by 3.64792

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.208
ELB improved by 2.79981

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.123
ELB improved by 2.08562

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.566
ELB improved by 1.55691

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.434
ELB improved by 1.13196

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.632
ELB improved by 0.80197

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.052
ELB improved by 0.579607

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.613
ELB improved by 0.438802

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.265
ELB improved by 0.348203

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.978
ELB improved by 0.287037

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.735
ELB improved by 0.243577

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.523
ELB improved by 0.211388

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.336
ELB improved by 0.186837

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.169
ELB improved by 0.167755

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.016
ELB improved by 0.152762

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.875
ELB improved by 0.14093

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.743
ELB improved by 0.131602

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.619
ELB improved by 0.124297

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.5
ELB improved by 0.118649

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.386
ELB improved by 0.114373

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.275
ELB improved by 0.11124

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.166
ELB improved by 0.10906

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.058
ELB improved by 0.107675

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.951
ELB improved by 0.10695

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.844
ELB improved by 0.106765

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.737
ELB improved by 0.107021

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.63
ELB improved by 0.107632

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.521
ELB improved by 0.108529

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.411
ELB improved by 0.109662

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.3
ELB improved by 0.111001

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.188
ELB improved by 0.112541

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.074
ELB improved by 0.114297

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.957
ELB improved by 0.11631

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.839
ELB improved by 0.118641

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.717
ELB improved by 0.121371

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.593
ELB improved by 0.124591

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.464
ELB improved by 0.128397

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.331
ELB improved by 0.13288

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.193
ELB improved by 0.138116

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.049
ELB improved by 0.14415

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.898
ELB improved by 0.150981

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.74
ELB improved by 0.158543

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.573
ELB improved by 0.166687

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.398
ELB improved by 0.175154

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.214
ELB improved by 0.183567

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.023
ELB improved by 0.191413

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.825
ELB improved by 0.19806

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.622
ELB improved by 0.202787

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.417
ELB improved by 0.204857

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.213
ELB improved by 0.203619

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.015
ELB improved by 0.198639

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.825
ELB improved by 0.189828

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.647
ELB improved by 0.177519

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.485
ELB improved by 0.162447

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.339
ELB improved by 0.145628

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.211
ELB improved by 0.128156

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.1
ELB improved by 0.111016

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.005
ELB improved by 0.094947

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.925
ELB improved by 0.0804127

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.857
ELB improved by 0.0676238

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.801
ELB improved by 0.0566042

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.753
ELB improved by 0.047257

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.714
ELB improved by 0.0394201

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.681
ELB improved by 0.0329047

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.654
ELB improved by 0.0275197

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.63
ELB improved by 0.0230865

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.611
ELB improved by 0.0194453

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.595
ELB improved by 0.0164576

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.581
ELB improved by 0.0140062

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.569
ELB improved by 0.0119932

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.558
ELB improved by 0.0103377

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.549
ELB improved by 0.00897355

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-887.029
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-571.775
ELB improved by 315.254

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-517.676
ELB improved by 54.0993

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-486.244
ELB improved by 31.4322

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-472.826
ELB improved by 13.4175

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.392
ELB improved by 6.43413

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.045
ELB improved by 4.34675

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.381
ELB improved by 3.66398

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.973
ELB improved by 3.40792

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.677
ELB improved by 3.29609

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.484
ELB improved by 3.19331

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.478
ELB improved by 3.00578

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.802
ELB improved by 2.6767

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.577
ELB improved by 2.22445

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.847
ELB improved by 1.73027

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.567
ELB improved by 1.28001

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.642
ELB improved by 0.924502

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.97
ELB improved by 0.672121

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.467
ELB improved by 0.503126

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.076
ELB improved by 0.390901

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.762
ELB improved by 0.314206

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.503
ELB improved by 0.259354

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.284
ELB improved by 0.218301

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.098
ELB improved by 0.186409

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.937
ELB improved by 0.160936

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.797
ELB improved by 0.140172

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.674
ELB improved by 0.122986

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.565
ELB improved by 0.10859

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.469
ELB improved by 0.0964124

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.383
ELB improved by 0.086024

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.306
ELB improved by 0.0770964

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.236
ELB improved by 0.0693736

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.174
ELB improved by 0.0626533

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.117
ELB improved by 0.0567738

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.065
ELB improved by 0.0516047

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.018
ELB improved by 0.0470397

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.975
ELB improved by 0.0429917

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.936
ELB improved by 0.0393886

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.9
ELB improved by 0.0361702

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.866
ELB improved by 0.0332865

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.836
ELB improved by 0.0306948

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.807
ELB improved by 0.0283593

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.781
ELB improved by 0.0262494

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.757
ELB improved by 0.0243388

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.734
ELB improved by 0.022605

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.713
ELB improved by 0.0210283

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.693
ELB improved by 0.0195919

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.675
ELB improved by 0.018281

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.658
ELB improved by 0.0170827

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.642
ELB improved by 0.0159856

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.627
ELB improved by 0.0149798

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.613
ELB improved by 0.0140565

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.6
ELB improved by 0.0132078

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.587
ELB improved by 0.0124267

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.576
ELB improved by 0.0117072

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.565
ELB improved by 0.0110436

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.554
ELB improved by 0.0104311

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.544
ELB improved by 0.00986517

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  2.818   0.264   3.125 

Example timings

graper.Rcheck/graper-Ex.timings

nameusersystemelapsed
coef.graper0.0890.0160.107
getPIPs0.0830.0120.097
graper0.1350.0190.158
makeExampleData0.0130.0010.014
makeExampleDataWithUnequalGroups0.0370.0080.044
plotELBO0.2590.0200.291
plotGroupPenalties0.7690.0360.833
plotPosterior0.6080.0260.638
predict.graper3.0690.0873.180
print.graper0.0830.0110.097