Back to the "Multiple platform build/check report"
Package 44/188 | OS | Arch | BUILD | CHECK | BUILD BIN |
copa1.2.0James W. MacDonald | Linux (SUSE 9.2) | x86_64 | OK | OK | |
Linux (SUSE 9.2) | i686 | OK | OK | ||
Solaris 2.9 | sparc | OK | [ OK ] | ||
Linux (SUSE 10.0) | x86_64 | OK | OK | ||
Windows Server 2003 | x86_64 | OK | OK | OK |
Package: copa |
Version: 1.2.0 |
Command: /loc/biocbuild/1.9d/R/bin/R CMD check copa_1.2.0.tar.gz |
RetCode: 0 |
Time: 796.0 seconds |
Status: OK |
CheckDir: copa.Rcheck |
Warnings: 0 |
* checking for working latex ... OK * using log directory '/loc/biocbuild/1.9d/Rpacks/copa.Rcheck' * using R version 2.4.0 (2006-10-03) * checking for file 'copa/DESCRIPTION' ... OK * this is package 'copa' version '1.2.0' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'copa' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for syntax errors ... OK * checking R files for non-ASCII characters ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the name space can be loaded with stated dependencies ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking for CRLF line endings in C/C++/Fortran sources/headers ... OK * checking for portable use of $BLAS_LIBS ... OK * creating copa-Ex.R ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * creating copa-manual.tex ... OK * checking copa-manual.tex ... OK
copa.Rcheck/00install.out:
* Installing *source* package 'copa' ... ** libs gcc -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -fPIC -g -O2 -std=gnu99 -Wall -c copa.c -o copa.o gcc -G -L/usr/local/lib -o copa.so copa.o ** R ** inst ** preparing package for lazy loading Loading required package: Biobase Loading required package: tools Welcome to Bioconductor Vignettes contain introductory material. To view, type 'openVignette()' or start with 'help(Biobase)'. For details on reading vignettes, see the openVignette help page. ** help >>> Building/Updating help pages for package 'copa' Formats: text html latex example copa text html latex example copa.package text html latex copaFilter text html latex copaPerm text html latex copaTable text html latex example getans text html latex pSum text html latex perm.mat text html latex plotCopa text html latex example scatterPlotCopa text html latex example ** building package indices ... * DONE (copa)