BioC experimental data: CHECK report for geuvStore on windows2.bioconductor.org

Package: geuvStore

Version: 1.3.0

Command: rm -rf geuvStore.buildbin-libdir geuvStore.Rcheck && mkdir geuvStore.buildbin-libdir geuvStore.Rcheck && c:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=geuvStore.buildbin-libdir geuvStore_1.3.0.tar.gz >geuvStore.Rcheck\00install.out 2>&1 && cp geuvStore.Rcheck\00install.out geuvStore-install.out && c:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD check --library=geuvStore.buildbin-libdir --install="check:geuvStore-install.out" --force-multiarch --no-vignettes --timings geuvStore_1.3.0.tar.gz

StartedAt: 2015-10-24 12:17:58 -0400 (Sat, 24 Oct 2015)

EndedAt: 2015-10-24 12:21:49 -0400 (Sat, 24 Oct 2015)

EllapsedTime: 230.5 seconds

RetCode: 0

Status:  WARNINGS

CheckDir: geuvStore.Rcheck

Warnings: 1

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### Running command:
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###   rm -rf geuvStore.buildbin-libdir geuvStore.Rcheck && mkdir geuvStore.buildbin-libdir geuvStore.Rcheck && c:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=geuvStore.buildbin-libdir geuvStore_1.3.0.tar.gz >geuvStore.Rcheck\00install.out 2>&1 && cp geuvStore.Rcheck\00install.out geuvStore-install.out  && c:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD check --library=geuvStore.buildbin-libdir --install="check:geuvStore-install.out" --force-multiarch --no-vignettes --timings geuvStore_1.3.0.tar.gz
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* using log directory 'c:/biocbld/bbs-3.3-data-experiment/meat/geuvStore.Rcheck'
* using R Under development (unstable) (2015-09-22 r69418)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'geuvStore/DESCRIPTION' ... OK
* this is package 'geuvStore' version '1.3.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'geuvStore' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 313.5Mb
  sub-directories of 1Mb or more:
    geuvStore  313.2Mb
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... WARNING
Undocumented code objects:
  'makeGeuvStore'
Undocumented data sets:
  'gvpm' 'gvrm'
All user-level objects in a package should have documentation entries.
See chapter 'Writing R documentation files' in the 'Writing R
Extensions' manual.
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... [6s] OK
** running examples for arch 'x64' ... [6s] OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 WARNING, 2 NOTEs
See
  'c:/biocbld/bbs-3.3-data-experiment/meat/geuvStore.Rcheck/00check.log'
for details.

install for i386

* installing *source* package 'geuvStore' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'geuvStore' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'geuvStore' as geuvStore_1.3.0.zip
* DONE (geuvStore)

name	user	system	elapsed
geuvStore-package	0.00	0.02	0.65
partialRegistry	0.61	0.00	0.61

name	user	system	elapsed
geuvStore-package	0	0	0
partialRegistry	0.46	0.00	0.47