BioC experimental data: CHECK report for ARRmData on windows2.bioconductor.org

Package: ARRmData

Version: 1.7.0

Command: rm -rf ARRmData.buildbin-libdir ARRmData.Rcheck && mkdir ARRmData.buildbin-libdir ARRmData.Rcheck && c:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=ARRmData.buildbin-libdir ARRmData_1.7.0.tar.gz >ARRmData.Rcheck\00install.out 2>&1 && cp ARRmData.Rcheck\00install.out ARRmData-install.out && c:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD check --library=ARRmData.buildbin-libdir --install="check:ARRmData-install.out" --force-multiarch --no-vignettes --timings ARRmData_1.7.0.tar.gz

StartedAt: 2015-10-24 11:49:39 -0400 (Sat, 24 Oct 2015)

EndedAt: 2015-10-24 11:50:24 -0400 (Sat, 24 Oct 2015)

EllapsedTime: 45.1 seconds

RetCode: 0

Status:  OK

CheckDir: ARRmData.Rcheck

Warnings: 0

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### Running command:
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###   rm -rf ARRmData.buildbin-libdir ARRmData.Rcheck && mkdir ARRmData.buildbin-libdir ARRmData.Rcheck && c:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=ARRmData.buildbin-libdir ARRmData_1.7.0.tar.gz >ARRmData.Rcheck\00install.out 2>&1 && cp ARRmData.Rcheck\00install.out ARRmData-install.out  && c:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD check --library=ARRmData.buildbin-libdir --install="check:ARRmData-install.out" --force-multiarch --no-vignettes --timings ARRmData_1.7.0.tar.gz
###
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* using log directory 'c:/biocbld/bbs-3.3-data-experiment/meat/ARRmData.Rcheck'
* using R Under development (unstable) (2015-09-22 r69418)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'ARRmData/DESCRIPTION' ... OK
* this is package 'ARRmData' version '1.7.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'ARRmData' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 56.5Mb
  sub-directories of 1Mb or more:
    data  56.5Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: 'ARRmNormalization'
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ...
** running examples for arch 'i386' ... [6s] OK
Examples with CPU or elapsed time > 5s
           user system elapsed
betaMatrix 5.33   0.16    5.48
** running examples for arch 'x64' ... [6s] OK
Examples with CPU or elapsed time > 5s
           user system elapsed
betaMatrix 5.22   0.11    5.34
* checking PDF version of manual ... OK
* DONE

Status: 3 NOTEs
See
  'c:/biocbld/bbs-3.3-data-experiment/meat/ARRmData.Rcheck/00check.log'
for details.

install for i386

* installing *source* package 'ARRmData' ...
** data
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded

install for x64

* installing *source* package 'ARRmData' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ARRmData' as ARRmData_1.7.0.zip
* DONE (ARRmData)

name	user	system	elapsed
betaMatrix	5.33	0.16	5.48
greenControlMatrix	0.00	0.00	0.42
redControlMatrix	0.01	0.00	0.02
sampleNames	0	0	0

name	user	system	elapsed
betaMatrix	5.22	0.11	5.34
greenControlMatrix	0.01	0.00	0.02
redControlMatrix	0	0	0
sampleNames	0	0	0