Back to Test Builds (Linux only) of a subset of BioC 3.21
using R 4.5 (devel) + _R_USE_STRICT_R_HEADERS_=true + _R_CXX_USE_NO_REMAP_=true
Report updated every 6 hours

This page was generated on 2024-11-12 09:57 -0500 (Tue, 12 Nov 2024).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2024-10-22 r87265) -- "Unsuffered Consequences" 855
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 96/210HostnameOS / ArchINSTALLBUILDCHECK
GenomicFeatures 1.59.1  (landing page)
H. Pagès
Snapshot Date: 2024-11-12 06:00 -0500 (Tue, 12 Nov 2024)
git_url: https://git.bioconductor.org/packages/GenomicFeatures
git_branch: devel
git_last_commit: 2d2ddd6
git_last_commit_date: 2024-11-06 21:45:17 -0500 (Wed, 06 Nov 2024)
teran2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  


BUILD results for GenomicFeatures on teran2

To the developers/maintainers of the GenomicFeatures package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: GenomicFeatures
Version: 1.59.1
Command: /home/bioctesting/bbs-3.21-bioc-testing/R/bin/R CMD build --keep-empty-dirs --no-resave-data GenomicFeatures
StartedAt: 2024-11-12 06:59:26 -0500 (Tue, 12 Nov 2024)
EndedAt: 2024-11-12 07:00:31 -0500 (Tue, 12 Nov 2024)
EllapsedTime: 65.3 seconds
RetCode: 0
Status:   OK  
PackageFile: GenomicFeatures_1.59.1.tar.gz
PackageFileSize: 556 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/bioctesting/bbs-3.21-bioc-testing/R/bin/R CMD build --keep-empty-dirs --no-resave-data GenomicFeatures
###
##############################################################################
##############################################################################


* checking for file ‘GenomicFeatures/DESCRIPTION’ ... OK
* preparing ‘GenomicFeatures’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
  NB: this package now depends on R (>= 3.5.0)
  WARNING: Added dependency on R >= 3.5.0 because serialized objects in
  serialize/load version 3 cannot be read in older versions of R.
  File(s) containing such objects:
    ‘GenomicFeatures/inst/extdata/sample_ranges.rds’
* building ‘GenomicFeatures_1.59.1.tar.gz’