Back to Multiple platform build/check report for BioC 3.20: simplified long |
|
This page was generated on 2024-09-12 11:50 -0400 (Thu, 12 Sep 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4713 |
teran2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4444 |
palomino8 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4450 |
lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4483 |
kjohnson3 | macOS 13.6.5 Ventura | arm64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4430 |
kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4428 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 970/2258 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
HPiP 1.11.0 (landing page) Matineh Rahmatbakhsh
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | |||||||||
teran2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | OK | ||||||||||
palomino8 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | OK | OK | |||||||||
kjohnson3 | macOS 13.6.5 Ventura / arm64 | OK | OK | OK | OK | |||||||||
kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | OK | OK | ||||||||||
To the developers/maintainers of the HPiP package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HPiP.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. |
Package: HPiP |
Version: 1.11.0 |
Command: /home/biocbuild/R/R/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings HPiP_1.11.0.tar.gz |
StartedAt: 2024-09-12 05:57:23 -0000 (Thu, 12 Sep 2024) |
EndedAt: 2024-09-12 06:03:24 -0000 (Thu, 12 Sep 2024) |
EllapsedTime: 361.7 seconds |
RetCode: 0 |
Status: OK |
CheckDir: HPiP.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings HPiP_1.11.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.20-bioc/meat/HPiP.Rcheck’ * using R version 4.4.1 (2024-06-14) * using platform: aarch64-unknown-linux-gnu * R was compiled by gcc (GCC) 12.2.1 20220819 (openEuler 12.2.1-14) GNU Fortran (GCC) 10.3.1 * running under: openEuler 22.03 (LTS-SP1) * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘HPiP/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘HPiP’ version ‘1.11.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘HPiP’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... NOTE License stub is invalid DCF. * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... NOTE checkRd: (-1) getHPI.Rd:29: Lost braces 29 | then the Kronecker product is the code{(pm × qn)} block matrix | ^ * checking Rd metadata ... OK * checking Rd cross-references ... NOTE Package unavailable to check Rd xrefs: ‘ftrCOOL’ * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking R/sysdata.rda ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed var_imp 40.769 0.831 41.669 corr_plot 38.693 0.559 39.318 FSmethod 38.269 0.523 38.864 pred_ensembel 18.421 0.325 16.369 enrichfindP 0.510 0.036 20.096 getFASTA 0.086 0.008 18.095 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘runTests.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: 3 NOTEs See ‘/home/biocbuild/bbs-3.20-bioc/meat/HPiP.Rcheck/00check.log’ for details.
HPiP.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD INSTALL HPiP ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/R/R-4.4.1/site-library’ * installing *source* package ‘HPiP’ ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HPiP)
HPiP.Rcheck/tests/runTests.Rout
R version 4.4.1 (2024-06-14) -- "Race for Your Life" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: aarch64-unknown-linux-gnu R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > BiocGenerics:::testPackage('HPiP') No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE avNNet Loading required package: ggplot2 Loading required package: lattice Fitting Repeat 1 # weights: 103 initial value 95.723231 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 106.437249 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 97.670243 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 100.046491 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 95.096024 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 101.795116 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 97.170419 iter 10 value 92.762065 iter 20 value 91.628612 final value 91.586490 converged Fitting Repeat 3 # weights: 305 initial value 96.170560 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 105.139212 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 107.675981 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 117.191377 iter 10 value 86.047055 iter 20 value 81.840420 iter 30 value 81.574922 final value 81.574760 converged Fitting Repeat 2 # weights: 507 initial value 103.878411 iter 10 value 94.090550 iter 20 value 93.613834 final value 93.612698 converged Fitting Repeat 3 # weights: 507 initial value 95.705805 final value 94.484210 converged Fitting Repeat 4 # weights: 507 initial value 117.720106 final value 94.026542 converged Fitting Repeat 5 # weights: 507 initial value 110.172965 iter 10 value 93.088900 final value 93.088889 converged Fitting Repeat 1 # weights: 103 initial value 106.074413 iter 10 value 88.848228 iter 20 value 84.341976 iter 30 value 83.256440 iter 40 value 82.765911 iter 50 value 82.563582 iter 60 value 82.530342 iter 70 value 82.396487 final value 82.386664 converged Fitting Repeat 2 # weights: 103 initial value 98.871063 iter 10 value 94.487557 iter 20 value 94.110692 iter 30 value 85.928050 iter 40 value 82.798145 iter 50 value 82.553289 iter 60 value 82.437376 iter 70 value 82.407018 iter 80 value 82.043363 iter 90 value 81.478554 iter 100 value 81.414084 final value 81.414084 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 100.487111 iter 10 value 94.446990 iter 20 value 85.176581 iter 30 value 83.866303 iter 40 value 83.573120 iter 50 value 83.210358 iter 60 value 82.618514 iter 70 value 82.443968 iter 80 value 82.407475 iter 90 value 82.386664 iter 90 value 82.386663 iter 90 value 82.386663 final value 82.386663 converged Fitting Repeat 4 # weights: 103 initial value 103.676882 iter 10 value 94.372631 iter 20 value 93.848887 iter 30 value 90.382371 iter 40 value 83.863937 iter 50 value 83.209114 iter 60 value 82.714832 iter 70 value 82.034360 iter 80 value 81.995941 final value 81.995930 converged Fitting Repeat 5 # weights: 103 initial value 96.693678 iter 10 value 94.486749 iter 20 value 93.864254 iter 30 value 93.773542 iter 40 value 93.717271 iter 50 value 90.376174 iter 60 value 84.376727 iter 70 value 83.392906 iter 80 value 83.341402 iter 90 value 82.712719 iter 100 value 82.468506 final value 82.468506 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 105.482589 iter 10 value 95.498079 iter 20 value 93.892037 iter 30 value 88.081952 iter 40 value 84.772072 iter 50 value 82.948149 iter 60 value 82.678205 iter 70 value 82.542080 iter 80 value 82.320420 iter 90 value 81.797997 iter 100 value 80.955119 final value 80.955119 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 104.114828 iter 10 value 94.037238 iter 20 value 92.705393 iter 30 value 90.930314 iter 40 value 90.559234 iter 50 value 84.353816 iter 60 value 81.573782 iter 70 value 80.696204 iter 80 value 80.528747 iter 90 value 80.293600 iter 100 value 80.137125 final value 80.137125 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 125.465496 iter 10 value 94.774368 iter 20 value 94.473156 iter 30 value 92.849080 iter 40 value 87.925000 iter 50 value 83.385294 iter 60 value 82.840741 iter 70 value 82.395742 iter 80 value 81.487345 iter 90 value 80.963625 iter 100 value 80.544073 final value 80.544073 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 100.622348 iter 10 value 87.295643 iter 20 value 83.457112 iter 30 value 82.777697 iter 40 value 82.595869 iter 50 value 82.550883 iter 60 value 82.416041 iter 70 value 82.380243 iter 80 value 82.211817 iter 90 value 82.092298 iter 100 value 81.675029 final value 81.675029 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 102.986605 iter 10 value 94.926945 iter 20 value 93.115198 iter 30 value 88.765778 iter 40 value 86.851528 iter 50 value 85.774887 iter 60 value 85.119325 iter 70 value 82.977007 iter 80 value 80.595791 iter 90 value 80.357314 iter 100 value 80.113540 final value 80.113540 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 129.536759 iter 10 value 94.501501 iter 20 value 90.746887 iter 30 value 88.173269 iter 40 value 83.646591 iter 50 value 82.289128 iter 60 value 82.253059 iter 70 value 81.817299 iter 80 value 81.579501 iter 90 value 81.233045 iter 100 value 80.567434 final value 80.567434 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 121.282513 iter 10 value 94.931405 iter 20 value 86.360635 iter 30 value 84.262912 iter 40 value 83.156057 iter 50 value 81.454377 iter 60 value 80.784808 iter 70 value 80.146147 iter 80 value 79.983585 iter 90 value 79.913369 iter 100 value 79.822804 final value 79.822804 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 103.879009 iter 10 value 94.538498 iter 20 value 91.064922 iter 30 value 88.966301 iter 40 value 88.537998 iter 50 value 83.264599 iter 60 value 82.476228 iter 70 value 81.987156 iter 80 value 81.878202 iter 90 value 81.365302 iter 100 value 80.727984 final value 80.727984 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 129.405245 iter 10 value 93.506646 iter 20 value 89.978690 iter 30 value 85.136737 iter 40 value 83.527282 iter 50 value 82.288271 iter 60 value 80.950173 iter 70 value 80.397473 iter 80 value 80.271865 iter 90 value 80.129627 iter 100 value 80.012287 final value 80.012287 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 110.782021 iter 10 value 94.550349 iter 20 value 93.859255 iter 30 value 90.380748 iter 40 value 86.365111 iter 50 value 82.816114 iter 60 value 80.956186 iter 70 value 80.517108 iter 80 value 80.145555 iter 90 value 79.926051 iter 100 value 79.882371 final value 79.882371 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 103.859502 final value 94.486079 converged Fitting Repeat 2 # weights: 103 initial value 102.205833 iter 10 value 93.747920 iter 20 value 93.629375 final value 93.629360 converged Fitting Repeat 3 # weights: 103 initial value 97.568704 iter 10 value 94.485883 iter 20 value 92.689570 iter 30 value 85.648442 iter 40 value 82.653679 iter 50 value 82.451844 iter 60 value 82.445375 final value 82.445101 converged Fitting Repeat 4 # weights: 103 initial value 100.024289 iter 10 value 94.485795 iter 20 value 94.479867 iter 30 value 93.644968 iter 40 value 93.621765 final value 93.615610 converged Fitting Repeat 5 # weights: 103 initial value 96.212090 final value 94.486054 converged Fitting Repeat 1 # weights: 305 initial value 108.311608 iter 10 value 94.490544 iter 20 value 94.419985 final value 94.027733 converged Fitting Repeat 2 # weights: 305 initial value 100.318577 iter 10 value 94.465506 iter 20 value 94.441205 iter 30 value 94.438171 iter 40 value 93.697461 iter 50 value 93.681127 final value 93.679986 converged Fitting Repeat 3 # weights: 305 initial value 101.278933 iter 10 value 94.031298 iter 20 value 94.027141 final value 94.026732 converged Fitting Repeat 4 # weights: 305 initial value 106.810238 iter 10 value 94.489712 iter 20 value 92.360226 iter 30 value 83.943549 iter 40 value 83.465073 iter 50 value 82.396355 iter 60 value 81.393120 iter 70 value 80.280331 iter 80 value 78.824010 iter 90 value 78.614000 iter 100 value 78.444413 final value 78.444413 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 95.983590 iter 10 value 86.702628 iter 20 value 85.710492 iter 30 value 82.727256 iter 40 value 82.695081 iter 50 value 82.680755 iter 60 value 82.679875 final value 82.679204 converged Fitting Repeat 1 # weights: 507 initial value 103.409216 iter 10 value 94.035425 iter 20 value 94.029415 iter 30 value 92.251837 iter 40 value 91.855792 final value 91.855714 converged Fitting Repeat 2 # weights: 507 initial value 98.498292 iter 10 value 93.810268 iter 20 value 93.802820 final value 93.802664 converged Fitting Repeat 3 # weights: 507 initial value 144.663972 iter 10 value 93.875226 iter 20 value 93.871188 iter 30 value 93.554509 iter 40 value 90.546665 iter 50 value 82.306219 iter 60 value 82.193073 iter 70 value 81.874548 iter 80 value 81.607446 final value 81.607432 converged Fitting Repeat 4 # weights: 507 initial value 97.355890 iter 10 value 94.491441 iter 20 value 94.471497 final value 94.026754 converged Fitting Repeat 5 # weights: 507 initial value 115.200502 iter 10 value 94.492649 iter 20 value 94.418412 iter 30 value 84.876649 iter 40 value 83.557457 iter 50 value 82.527414 final value 82.505945 converged Fitting Repeat 1 # weights: 103 initial value 99.563932 iter 10 value 93.970585 iter 20 value 93.962021 final value 93.962012 converged Fitting Repeat 2 # weights: 103 initial value 108.072307 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 102.301201 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 97.539640 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 102.951072 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 95.286774 final value 94.022599 converged Fitting Repeat 2 # weights: 305 initial value 104.102697 iter 10 value 93.962019 final value 93.962011 converged Fitting Repeat 3 # weights: 305 initial value 100.718285 final value 94.052910 converged Fitting Repeat 4 # weights: 305 initial value 117.160629 final value 94.052910 converged Fitting Repeat 5 # weights: 305 initial value 103.000985 iter 10 value 92.211138 final value 92.211111 converged Fitting Repeat 1 # weights: 507 initial value 95.361308 final value 94.052910 converged Fitting Repeat 2 # weights: 507 initial value 119.683152 iter 10 value 94.008696 iter 10 value 94.008696 iter 10 value 94.008696 final value 94.008696 converged Fitting Repeat 3 # weights: 507 initial value 107.478627 final value 94.008696 converged Fitting Repeat 4 # weights: 507 initial value 111.114135 iter 10 value 92.335042 iter 20 value 91.966849 iter 30 value 91.397287 iter 30 value 91.397287 iter 30 value 91.397287 final value 91.397287 converged Fitting Repeat 5 # weights: 507 initial value 99.947248 iter 10 value 93.379439 final value 93.288889 converged Fitting Repeat 1 # weights: 103 initial value 113.186465 iter 10 value 93.741708 iter 20 value 86.519456 iter 30 value 85.337421 iter 40 value 84.008811 iter 50 value 83.526723 iter 60 value 83.514172 iter 70 value 83.513963 iter 70 value 83.513963 iter 70 value 83.513963 final value 83.513963 converged Fitting Repeat 2 # weights: 103 initial value 100.304689 iter 10 value 94.059457 iter 20 value 93.447347 iter 30 value 87.606040 iter 40 value 85.968770 iter 50 value 85.678779 iter 60 value 84.149962 iter 70 value 83.703943 iter 80 value 83.532461 final value 83.530343 converged Fitting Repeat 3 # weights: 103 initial value 99.909213 iter 10 value 91.148057 iter 20 value 84.711936 iter 30 value 84.315539 iter 40 value 83.880091 iter 50 value 83.541109 final value 83.530342 converged Fitting Repeat 4 # weights: 103 initial value 102.795081 iter 10 value 94.040752 iter 20 value 92.996042 iter 30 value 92.862094 iter 40 value 92.601874 iter 50 value 92.381825 iter 60 value 92.122892 iter 70 value 85.887791 iter 80 value 85.191687 iter 90 value 85.075549 iter 100 value 84.888287 final value 84.888287 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 105.906075 iter 10 value 93.593080 iter 20 value 88.850652 iter 30 value 87.158357 iter 40 value 85.578913 iter 50 value 84.771840 iter 60 value 84.764015 iter 60 value 84.764015 final value 84.764015 converged Fitting Repeat 1 # weights: 305 initial value 100.060694 iter 10 value 94.054915 iter 20 value 88.289664 iter 30 value 84.799224 iter 40 value 84.541642 iter 50 value 84.509894 iter 60 value 84.397789 iter 70 value 83.795389 iter 80 value 83.303043 iter 90 value 82.251086 iter 100 value 82.052879 final value 82.052879 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 102.485727 iter 10 value 94.346595 iter 20 value 86.406001 iter 30 value 84.631126 iter 40 value 82.954041 iter 50 value 81.630485 iter 60 value 81.128342 iter 70 value 81.086486 iter 80 value 81.064471 iter 90 value 81.047022 iter 100 value 81.021824 final value 81.021824 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 110.175229 iter 10 value 94.111592 iter 20 value 90.211609 iter 30 value 87.261732 iter 40 value 85.742868 iter 50 value 84.674424 iter 60 value 82.201776 iter 70 value 81.869405 iter 80 value 81.737519 iter 90 value 81.518851 iter 100 value 81.174429 final value 81.174429 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 108.982551 iter 10 value 94.050637 iter 20 value 92.398726 iter 30 value 86.689365 iter 40 value 84.955739 iter 50 value 84.578898 iter 60 value 84.391499 iter 70 value 84.354003 iter 80 value 84.244800 iter 90 value 83.210238 iter 100 value 82.027759 final value 82.027759 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 112.485680 iter 10 value 94.531678 iter 20 value 92.518664 iter 30 value 85.495460 iter 40 value 84.079534 iter 50 value 83.581892 iter 60 value 82.431285 iter 70 value 82.100436 iter 80 value 81.528441 iter 90 value 81.340272 iter 100 value 81.295989 final value 81.295989 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 103.228163 iter 10 value 93.298299 iter 20 value 89.722676 iter 30 value 85.482517 iter 40 value 84.423927 iter 50 value 83.922404 iter 60 value 83.379930 iter 70 value 82.039963 iter 80 value 81.353707 iter 90 value 81.123289 iter 100 value 81.094394 final value 81.094394 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 123.020532 iter 10 value 93.227632 iter 20 value 88.836655 iter 30 value 87.179150 iter 40 value 83.753843 iter 50 value 82.646595 iter 60 value 81.502696 iter 70 value 81.301472 iter 80 value 81.102126 iter 90 value 80.828148 iter 100 value 80.605740 final value 80.605740 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 102.321513 iter 10 value 95.814940 iter 20 value 85.631701 iter 30 value 84.677509 iter 40 value 83.391365 iter 50 value 83.249806 iter 60 value 82.811211 iter 70 value 82.275302 iter 80 value 81.681576 iter 90 value 81.302242 iter 100 value 81.172867 final value 81.172867 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 116.339542 iter 10 value 94.007519 iter 20 value 88.322016 iter 30 value 85.074215 iter 40 value 84.619934 iter 50 value 84.380527 iter 60 value 83.634387 iter 70 value 82.675374 iter 80 value 82.034832 iter 90 value 81.643606 iter 100 value 81.514348 final value 81.514348 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 132.396589 iter 10 value 94.884588 iter 20 value 89.795716 iter 30 value 85.473847 iter 40 value 84.621906 iter 50 value 84.157665 iter 60 value 83.540025 iter 70 value 83.202133 iter 80 value 82.651117 iter 90 value 82.125655 iter 100 value 82.002750 final value 82.002750 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 98.370347 final value 94.054432 converged Fitting Repeat 2 # weights: 103 initial value 94.631642 final value 94.054425 converged Fitting Repeat 3 # weights: 103 initial value 97.231001 final value 94.054636 converged Fitting Repeat 4 # weights: 103 initial value 98.092614 final value 94.054357 converged Fitting Repeat 5 # weights: 103 initial value 96.755414 final value 94.054619 converged Fitting Repeat 1 # weights: 305 initial value 103.683058 iter 10 value 94.058036 iter 20 value 93.549877 iter 30 value 91.136639 iter 40 value 84.797957 iter 50 value 84.797430 iter 60 value 84.757378 iter 70 value 84.700451 iter 80 value 84.354194 iter 90 value 84.109941 iter 100 value 84.082449 final value 84.082449 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 96.188791 iter 10 value 94.057966 iter 20 value 94.052811 iter 30 value 92.445270 iter 40 value 91.949069 iter 50 value 86.934999 iter 60 value 83.762641 iter 70 value 81.938627 iter 80 value 81.838976 final value 81.838935 converged Fitting Repeat 3 # weights: 305 initial value 96.194496 iter 10 value 94.052723 iter 20 value 84.864549 iter 30 value 84.502827 iter 40 value 84.496551 iter 50 value 84.024944 iter 60 value 83.793896 iter 70 value 83.703957 final value 83.703392 converged Fitting Repeat 4 # weights: 305 initial value 103.029444 iter 10 value 94.057697 iter 20 value 93.982818 iter 30 value 88.695086 iter 40 value 87.380165 iter 50 value 87.327905 final value 87.210315 converged Fitting Repeat 5 # weights: 305 initial value 96.289696 iter 10 value 93.975794 iter 20 value 93.967027 iter 30 value 93.615991 iter 40 value 88.421802 iter 50 value 84.769301 iter 60 value 84.754609 iter 70 value 84.754371 iter 80 value 83.659059 iter 90 value 81.872106 iter 100 value 81.325228 final value 81.325228 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 98.845542 iter 10 value 91.788180 iter 20 value 91.765162 iter 30 value 91.762597 iter 40 value 90.971961 iter 50 value 83.184316 iter 60 value 83.176902 final value 83.160801 converged Fitting Repeat 2 # weights: 507 initial value 110.711668 iter 10 value 94.055512 iter 20 value 93.357047 iter 30 value 93.290069 iter 40 value 85.691875 iter 50 value 84.180306 iter 60 value 83.685451 iter 70 value 83.334248 iter 80 value 83.329976 iter 90 value 83.329699 iter 100 value 83.329294 final value 83.329294 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 110.493261 iter 10 value 94.026283 iter 20 value 94.016229 iter 30 value 94.008978 iter 40 value 92.565612 iter 50 value 85.222951 iter 60 value 84.474368 iter 70 value 83.766723 iter 80 value 83.590336 iter 90 value 83.429195 iter 100 value 83.426149 final value 83.426149 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 104.057861 iter 10 value 94.016803 iter 20 value 94.014213 iter 30 value 94.013080 iter 40 value 88.882521 iter 50 value 84.537904 iter 60 value 84.328991 iter 70 value 84.297776 iter 80 value 84.078054 iter 90 value 84.077691 iter 100 value 84.076365 final value 84.076365 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 102.062712 iter 10 value 94.059328 iter 20 value 93.833801 iter 30 value 89.825715 iter 40 value 89.676292 iter 50 value 89.475558 iter 60 value 89.311761 iter 70 value 87.696767 iter 80 value 84.040912 iter 90 value 82.963109 iter 100 value 82.620014 final value 82.620014 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 98.204549 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 99.526362 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 94.555964 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 98.056939 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 102.233607 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 103.980058 iter 10 value 94.011429 iter 10 value 94.011429 iter 10 value 94.011429 final value 94.011429 converged Fitting Repeat 2 # weights: 305 initial value 113.428621 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 95.047185 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 97.404395 iter 10 value 86.375017 iter 20 value 84.498660 final value 84.498138 converged Fitting Repeat 5 # weights: 305 initial value 106.356991 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 95.324215 final value 94.484211 converged Fitting Repeat 2 # weights: 507 initial value 101.874409 iter 10 value 94.116956 iter 20 value 93.795502 iter 30 value 93.793883 iter 40 value 92.888762 iter 50 value 91.531011 iter 60 value 91.412261 iter 70 value 88.061369 iter 80 value 86.097088 iter 90 value 86.096134 final value 86.096130 converged Fitting Repeat 3 # weights: 507 initial value 97.831114 final value 94.452424 converged Fitting Repeat 4 # weights: 507 initial value 100.324438 final value 94.484211 converged Fitting Repeat 5 # weights: 507 initial value 99.438209 iter 10 value 93.006836 final value 92.906854 converged Fitting Repeat 1 # weights: 103 initial value 100.331792 iter 10 value 94.487801 iter 20 value 93.695637 iter 30 value 87.935725 iter 40 value 83.172720 iter 50 value 82.648340 iter 60 value 81.426713 iter 70 value 81.179865 iter 80 value 81.154861 iter 90 value 81.091930 iter 100 value 81.040880 final value 81.040880 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 111.596155 iter 10 value 94.519932 iter 20 value 94.486721 iter 30 value 88.448274 iter 40 value 86.245022 iter 50 value 85.790263 iter 60 value 85.732968 iter 70 value 85.663024 iter 80 value 85.442022 final value 85.434125 converged Fitting Repeat 3 # weights: 103 initial value 107.008085 iter 10 value 94.353954 iter 20 value 88.804677 iter 30 value 86.267876 iter 40 value 85.829421 iter 50 value 85.703483 iter 60 value 85.500448 iter 70 value 85.434127 final value 85.434125 converged Fitting Repeat 4 # weights: 103 initial value 111.606293 iter 10 value 94.469082 iter 20 value 87.445323 iter 30 value 87.277997 iter 40 value 85.987288 iter 50 value 85.580041 iter 60 value 85.578794 iter 70 value 85.434186 final value 85.434126 converged Fitting Repeat 5 # weights: 103 initial value 99.715987 iter 10 value 94.486521 iter 20 value 94.254568 iter 30 value 93.900819 iter 40 value 93.893087 iter 50 value 93.892821 iter 60 value 93.892289 iter 70 value 87.845930 iter 80 value 84.632023 iter 90 value 84.301490 iter 100 value 83.809256 final value 83.809256 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 100.786675 iter 10 value 95.002287 iter 20 value 94.299459 iter 30 value 87.407073 iter 40 value 86.286463 iter 50 value 85.318420 iter 60 value 83.531270 iter 70 value 81.116103 iter 80 value 80.281518 iter 90 value 80.122944 iter 100 value 79.987659 final value 79.987659 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 100.536882 iter 10 value 94.383681 iter 20 value 94.066737 iter 30 value 85.215725 iter 40 value 84.931605 iter 50 value 83.099116 iter 60 value 82.391692 iter 70 value 82.141333 iter 80 value 81.960798 iter 90 value 81.901333 iter 100 value 81.758086 final value 81.758086 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 122.062029 iter 10 value 94.789456 iter 20 value 93.271436 iter 30 value 91.622794 iter 40 value 91.354770 iter 50 value 91.292133 iter 60 value 88.661315 iter 70 value 86.333455 iter 80 value 85.770068 iter 90 value 85.667077 iter 100 value 83.000088 final value 83.000088 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 107.950838 iter 10 value 94.472194 iter 20 value 88.519368 iter 30 value 85.009149 iter 40 value 82.221246 iter 50 value 80.869528 iter 60 value 80.619075 iter 70 value 80.066110 iter 80 value 79.795420 iter 90 value 79.618892 iter 100 value 79.473830 final value 79.473830 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 100.791249 iter 10 value 94.379676 iter 20 value 88.517310 iter 30 value 87.474861 iter 40 value 87.152051 iter 50 value 85.436186 iter 60 value 83.604691 iter 70 value 80.893661 iter 80 value 80.526744 iter 90 value 80.503001 iter 100 value 80.358948 final value 80.358948 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 137.617076 iter 10 value 97.165018 iter 20 value 91.661791 iter 30 value 85.494983 iter 40 value 82.757188 iter 50 value 81.868726 iter 60 value 81.064727 iter 70 value 80.536178 iter 80 value 80.349075 iter 90 value 80.337739 iter 100 value 80.251824 final value 80.251824 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 113.323135 iter 10 value 93.926588 iter 20 value 86.246139 iter 30 value 84.559313 iter 40 value 82.952968 iter 50 value 81.072275 iter 60 value 79.864913 iter 70 value 79.659810 iter 80 value 79.616704 iter 90 value 79.538471 iter 100 value 79.460715 final value 79.460715 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 104.636573 iter 10 value 94.425708 iter 20 value 89.680031 iter 30 value 85.151150 iter 40 value 84.490675 iter 50 value 83.247795 iter 60 value 82.508752 iter 70 value 82.080739 iter 80 value 81.498242 iter 90 value 80.756625 iter 100 value 80.394111 final value 80.394111 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 123.550342 iter 10 value 94.421211 iter 20 value 87.305438 iter 30 value 86.977118 iter 40 value 84.173873 iter 50 value 82.025628 iter 60 value 80.933548 iter 70 value 79.668907 iter 80 value 79.474762 iter 90 value 79.416225 iter 100 value 79.383044 final value 79.383044 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 111.407084 iter 10 value 94.538764 iter 20 value 87.802779 iter 30 value 84.965909 iter 40 value 84.342756 iter 50 value 82.401210 iter 60 value 80.747650 iter 70 value 80.525465 iter 80 value 80.097094 iter 90 value 79.793046 iter 100 value 79.529175 final value 79.529175 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 101.199970 iter 10 value 94.463027 iter 20 value 94.140799 iter 30 value 88.485726 iter 40 value 88.422398 iter 50 value 88.420538 iter 60 value 88.420459 iter 60 value 88.420458 iter 60 value 88.420457 final value 88.420457 converged Fitting Repeat 2 # weights: 103 initial value 95.355900 final value 94.486064 converged Fitting Repeat 3 # weights: 103 initial value 96.074850 final value 94.485657 converged Fitting Repeat 4 # weights: 103 initial value 99.895672 final value 94.485791 converged Fitting Repeat 5 # weights: 103 initial value 101.043291 final value 94.485788 converged Fitting Repeat 1 # weights: 305 initial value 101.810912 iter 10 value 94.466455 iter 20 value 94.464688 iter 30 value 94.462680 iter 40 value 94.018148 iter 50 value 92.637204 iter 60 value 92.615208 final value 92.615188 converged Fitting Repeat 2 # weights: 305 initial value 102.236890 iter 10 value 93.815082 iter 20 value 93.797862 final value 93.796071 converged Fitting Repeat 3 # weights: 305 initial value 101.733216 iter 10 value 93.187591 iter 20 value 93.166143 final value 93.165904 converged Fitting Repeat 4 # weights: 305 initial value 96.658213 iter 10 value 93.305279 iter 20 value 93.300480 iter 30 value 93.293713 iter 40 value 92.883916 iter 50 value 83.402817 iter 60 value 81.146572 iter 70 value 80.450653 iter 80 value 80.447680 final value 80.447668 converged Fitting Repeat 5 # weights: 305 initial value 96.472763 iter 10 value 93.604275 iter 20 value 87.339822 iter 30 value 87.217190 iter 40 value 87.216760 iter 50 value 85.713931 iter 60 value 84.298342 iter 70 value 84.020106 final value 84.019595 converged Fitting Repeat 1 # weights: 507 initial value 97.386597 iter 10 value 90.603692 iter 20 value 83.341347 iter 30 value 83.292744 final value 83.290307 converged Fitting Repeat 2 # weights: 507 initial value 102.888688 iter 10 value 93.818028 iter 20 value 93.796254 final value 93.795607 converged Fitting Repeat 3 # weights: 507 initial value 107.179937 iter 10 value 94.035373 iter 20 value 94.031004 iter 30 value 94.029623 iter 40 value 94.013108 iter 50 value 93.809636 iter 60 value 93.795543 final value 93.795539 converged Fitting Repeat 4 # weights: 507 initial value 101.053635 iter 10 value 93.844739 iter 20 value 93.708441 iter 30 value 92.407677 iter 40 value 91.961963 iter 50 value 91.952612 iter 60 value 91.872702 iter 70 value 91.856082 iter 80 value 91.855666 final value 91.855182 converged Fitting Repeat 5 # weights: 507 initial value 115.861019 iter 10 value 94.035410 iter 20 value 88.975385 iter 30 value 86.757849 iter 40 value 85.593828 iter 50 value 85.561641 iter 50 value 85.561641 iter 50 value 85.561641 final value 85.561641 converged Fitting Repeat 1 # weights: 103 initial value 96.727441 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 104.950482 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 100.309288 iter 10 value 93.213448 final value 93.210526 converged Fitting Repeat 4 # weights: 103 initial value 97.560987 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 101.049807 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 96.671924 final value 93.867392 converged Fitting Repeat 2 # weights: 305 initial value 94.714492 iter 10 value 87.753168 iter 20 value 87.745155 final value 87.745010 converged Fitting Repeat 3 # weights: 305 initial value 99.808309 final value 94.052910 converged Fitting Repeat 4 # weights: 305 initial value 100.414224 iter 10 value 93.425221 iter 20 value 93.304365 iter 30 value 93.304243 iter 30 value 93.304243 iter 30 value 93.304243 final value 93.304243 converged Fitting Repeat 5 # weights: 305 initial value 98.018397 final value 94.052910 converged Fitting Repeat 1 # weights: 507 initial value 110.310548 final value 94.052910 converged Fitting Repeat 2 # weights: 507 initial value 116.441949 final value 94.052910 converged Fitting Repeat 3 # weights: 507 initial value 95.147812 iter 10 value 88.319890 final value 88.139994 converged Fitting Repeat 4 # weights: 507 initial value 97.753190 iter 10 value 93.856673 final value 93.855556 converged Fitting Repeat 5 # weights: 507 initial value 99.919430 final value 94.052910 converged Fitting Repeat 1 # weights: 103 initial value 102.425560 iter 10 value 94.070126 iter 20 value 93.887082 iter 30 value 91.368443 iter 40 value 86.588112 iter 50 value 86.354117 iter 60 value 86.108772 iter 70 value 85.593574 iter 80 value 84.656293 iter 90 value 83.852242 iter 100 value 83.456704 final value 83.456704 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 97.732637 iter 10 value 92.857092 iter 20 value 89.747866 iter 30 value 88.384674 iter 40 value 86.608888 iter 50 value 86.386188 iter 60 value 85.689852 iter 70 value 85.480683 final value 85.480171 converged Fitting Repeat 3 # weights: 103 initial value 102.761017 iter 10 value 93.828262 iter 20 value 90.984601 iter 30 value 88.373583 iter 40 value 86.706808 iter 50 value 86.579525 iter 60 value 86.510486 iter 70 value 86.462153 iter 80 value 86.401490 iter 90 value 85.900288 iter 100 value 85.875335 final value 85.875335 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 101.837642 iter 10 value 94.056746 iter 20 value 93.955747 iter 30 value 92.396596 iter 40 value 91.061370 iter 50 value 89.023830 iter 60 value 88.684636 iter 70 value 88.111726 iter 80 value 86.393504 iter 90 value 86.319547 iter 100 value 86.151163 final value 86.151163 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 107.364140 iter 10 value 93.982177 iter 20 value 89.720589 iter 30 value 87.180298 iter 40 value 86.772687 iter 50 value 86.623772 iter 60 value 86.137688 iter 70 value 85.772830 iter 80 value 85.517871 iter 90 value 84.793712 iter 100 value 83.879881 final value 83.879881 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 115.006432 iter 10 value 94.064946 iter 20 value 91.928349 iter 30 value 87.182708 iter 40 value 86.651706 iter 50 value 84.225634 iter 60 value 83.547264 iter 70 value 82.719494 iter 80 value 82.480107 iter 90 value 82.423408 iter 100 value 82.278204 final value 82.278204 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 105.239843 iter 10 value 94.050834 iter 20 value 91.155572 iter 30 value 88.509944 iter 40 value 87.024894 iter 50 value 85.921983 iter 60 value 84.302204 iter 70 value 83.700451 iter 80 value 83.659444 iter 90 value 83.485981 iter 100 value 83.420648 final value 83.420648 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 110.697269 iter 10 value 94.041898 iter 20 value 88.606126 iter 30 value 87.200377 iter 40 value 83.855020 iter 50 value 82.893830 iter 60 value 82.569330 iter 70 value 82.381481 iter 80 value 82.278968 iter 90 value 82.114565 iter 100 value 82.068497 final value 82.068497 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 105.620233 iter 10 value 94.196902 iter 20 value 94.147767 iter 30 value 93.963724 iter 40 value 89.167599 iter 50 value 88.459863 iter 60 value 86.643908 iter 70 value 83.428855 iter 80 value 82.850381 iter 90 value 82.253364 iter 100 value 82.155870 final value 82.155870 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 123.392720 iter 10 value 94.191070 iter 20 value 91.104909 iter 30 value 88.940028 iter 40 value 86.412815 iter 50 value 84.434300 iter 60 value 83.574237 iter 70 value 83.068859 iter 80 value 82.664625 iter 90 value 82.517443 iter 100 value 82.237944 final value 82.237944 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 104.266741 iter 10 value 94.019201 iter 20 value 93.919512 iter 30 value 90.268120 iter 40 value 87.576572 iter 50 value 86.634214 iter 60 value 84.771920 iter 70 value 83.771462 iter 80 value 83.454528 iter 90 value 83.336592 iter 100 value 83.175464 final value 83.175464 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 109.249255 iter 10 value 94.408320 iter 20 value 87.778861 iter 30 value 85.835330 iter 40 value 85.685183 iter 50 value 85.380317 iter 60 value 84.850497 iter 70 value 84.300171 iter 80 value 82.902028 iter 90 value 82.557248 iter 100 value 82.440410 final value 82.440410 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 127.624661 iter 10 value 93.940339 iter 20 value 89.155727 iter 30 value 87.233316 iter 40 value 86.598049 iter 50 value 86.304427 iter 60 value 84.791475 iter 70 value 83.701162 iter 80 value 82.377042 iter 90 value 82.109065 iter 100 value 82.026195 final value 82.026195 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 119.457801 iter 10 value 94.714897 iter 20 value 89.233661 iter 30 value 88.108904 iter 40 value 87.522319 iter 50 value 83.988768 iter 60 value 82.666208 iter 70 value 82.301242 iter 80 value 82.263196 iter 90 value 82.147660 iter 100 value 82.122281 final value 82.122281 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 107.236357 iter 10 value 93.963465 iter 20 value 88.721941 iter 30 value 87.290678 iter 40 value 85.512397 iter 50 value 83.323542 iter 60 value 82.715105 iter 70 value 82.550445 iter 80 value 82.487065 iter 90 value 82.377697 iter 100 value 82.222875 final value 82.222875 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 98.305732 final value 94.054539 converged Fitting Repeat 2 # weights: 103 initial value 98.650676 final value 94.054496 converged Fitting Repeat 3 # weights: 103 initial value 97.766450 final value 94.054567 converged Fitting Repeat 4 # weights: 103 initial value 100.596294 final value 94.054288 converged Fitting Repeat 5 # weights: 103 initial value 104.518314 final value 94.054486 converged Fitting Repeat 1 # weights: 305 initial value 110.672540 iter 10 value 94.057427 iter 20 value 94.053079 iter 30 value 93.957463 iter 40 value 93.004807 iter 50 value 88.512426 iter 60 value 87.460721 iter 70 value 86.950776 iter 80 value 86.946717 final value 86.946639 converged Fitting Repeat 2 # weights: 305 initial value 100.093383 iter 10 value 93.252623 iter 20 value 93.188242 iter 30 value 93.186471 iter 40 value 93.185856 iter 50 value 91.951234 iter 60 value 89.701036 iter 70 value 86.492100 iter 80 value 83.961897 iter 90 value 83.929356 iter 100 value 83.928080 final value 83.928080 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 95.577228 iter 10 value 93.702474 iter 20 value 93.697176 iter 30 value 93.694014 final value 93.693228 converged Fitting Repeat 4 # weights: 305 initial value 93.913588 iter 10 value 86.011558 iter 20 value 85.786751 iter 30 value 85.564748 iter 40 value 84.805352 final value 84.663471 converged Fitting Repeat 5 # weights: 305 initial value 100.138971 iter 10 value 94.058083 iter 20 value 93.942281 iter 30 value 86.383444 iter 40 value 86.381680 iter 50 value 86.380147 iter 60 value 85.883646 iter 70 value 85.854669 iter 80 value 85.849801 iter 90 value 85.785867 iter 100 value 85.610371 final value 85.610371 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 112.182232 iter 10 value 93.877019 iter 20 value 93.870414 iter 30 value 93.863376 iter 40 value 93.126004 iter 50 value 92.995247 iter 60 value 92.578746 iter 70 value 86.632393 iter 80 value 85.292326 iter 90 value 84.932533 iter 100 value 84.926638 final value 84.926638 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 98.723490 iter 10 value 91.965490 iter 20 value 85.900947 iter 30 value 85.855040 iter 40 value 84.607123 iter 50 value 82.997695 iter 60 value 82.301706 iter 70 value 80.908499 iter 80 value 80.614057 iter 90 value 80.414347 iter 100 value 80.326938 final value 80.326938 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 97.074547 iter 10 value 94.060117 iter 20 value 94.033545 iter 30 value 89.659972 iter 40 value 87.052580 iter 50 value 87.048589 final value 87.048401 converged Fitting Repeat 4 # weights: 507 initial value 102.359585 iter 10 value 93.781175 iter 20 value 93.779235 iter 30 value 90.911040 iter 40 value 87.225403 iter 50 value 86.785437 iter 60 value 85.382862 iter 70 value 85.239471 iter 80 value 84.710576 iter 90 value 83.856990 iter 100 value 83.835084 final value 83.835084 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 98.214152 iter 10 value 93.383710 iter 20 value 88.487488 iter 30 value 85.171690 iter 40 value 85.169279 iter 40 value 85.169279 final value 85.169274 converged Fitting Repeat 1 # weights: 103 initial value 95.540789 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 96.039149 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 98.813831 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 96.732382 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 102.793938 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 103.326153 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 115.053539 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 103.027670 final value 94.461538 converged Fitting Repeat 4 # weights: 305 initial value 96.888635 iter 10 value 94.352663 iter 20 value 94.336267 final value 94.336207 converged Fitting Repeat 5 # weights: 305 initial value 100.100317 final value 94.354396 converged Fitting Repeat 1 # weights: 507 initial value 121.641536 final value 94.484211 converged Fitting Repeat 2 # weights: 507 initial value 96.516943 iter 10 value 89.054485 iter 20 value 83.294848 final value 83.288839 converged Fitting Repeat 3 # weights: 507 initial value 98.190652 final value 94.484211 converged Fitting Repeat 4 # weights: 507 initial value 123.136965 final value 94.484211 converged Fitting Repeat 5 # weights: 507 initial value 97.058690 iter 10 value 85.833103 iter 20 value 80.695963 iter 30 value 80.274678 iter 40 value 80.271812 final value 80.271515 converged Fitting Repeat 1 # weights: 103 initial value 102.889356 iter 10 value 94.386408 iter 20 value 87.648220 iter 30 value 86.929376 iter 40 value 85.655140 iter 50 value 80.145588 iter 60 value 79.911467 iter 70 value 79.902478 iter 80 value 79.894518 final value 79.893266 converged Fitting Repeat 2 # weights: 103 initial value 97.477603 iter 10 value 94.397791 iter 20 value 94.381270 iter 30 value 83.272924 iter 40 value 81.389040 iter 50 value 81.179577 iter 60 value 81.150646 iter 70 value 81.051342 iter 80 value 80.565268 iter 90 value 80.526416 iter 100 value 80.507994 final value 80.507994 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 103.620091 iter 10 value 94.494177 iter 20 value 92.370196 iter 30 value 83.639907 iter 40 value 82.287531 iter 50 value 80.947232 iter 60 value 80.744250 iter 70 value 80.521919 iter 80 value 80.518471 iter 90 value 80.511228 iter 100 value 80.507993 final value 80.507993 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 101.113440 iter 10 value 94.511941 iter 20 value 94.466813 iter 30 value 86.069314 iter 40 value 84.935149 iter 50 value 84.787776 iter 60 value 81.181701 iter 70 value 80.495939 iter 80 value 79.658215 iter 90 value 79.090758 iter 100 value 78.344974 final value 78.344974 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 104.298072 iter 10 value 94.486752 iter 20 value 94.409554 iter 30 value 94.394758 iter 40 value 94.383046 iter 50 value 91.626984 iter 60 value 82.716650 iter 70 value 82.619032 iter 80 value 82.599769 iter 90 value 82.511176 iter 100 value 81.369363 final value 81.369363 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 101.332844 iter 10 value 87.323473 iter 20 value 82.006268 iter 30 value 81.583301 iter 40 value 81.137645 iter 50 value 79.827250 iter 60 value 79.635632 iter 70 value 79.583770 iter 80 value 79.578248 iter 90 value 79.372049 iter 100 value 78.351623 final value 78.351623 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 128.461209 iter 10 value 94.933981 iter 20 value 86.058031 iter 30 value 84.518869 iter 40 value 81.482991 iter 50 value 80.228828 iter 60 value 79.027903 iter 70 value 77.904304 iter 80 value 77.443995 iter 90 value 77.318773 iter 100 value 76.774007 final value 76.774007 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 106.205118 iter 10 value 96.423026 iter 20 value 88.348215 iter 30 value 85.976420 iter 40 value 83.290281 iter 50 value 82.323390 iter 60 value 82.187305 iter 70 value 82.059532 iter 80 value 81.995980 iter 90 value 81.042677 iter 100 value 78.337441 final value 78.337441 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 105.620343 iter 10 value 94.872114 iter 20 value 94.380303 iter 30 value 82.467853 iter 40 value 81.772240 iter 50 value 80.124589 iter 60 value 78.959687 iter 70 value 78.672468 iter 80 value 77.758278 iter 90 value 77.324788 iter 100 value 77.062716 final value 77.062716 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 107.345888 iter 10 value 91.881571 iter 20 value 83.427166 iter 30 value 80.383877 iter 40 value 80.279079 iter 50 value 80.154545 iter 60 value 79.628023 iter 70 value 78.412771 iter 80 value 78.040940 iter 90 value 77.682287 iter 100 value 77.494378 final value 77.494378 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 113.054362 iter 10 value 94.548063 iter 20 value 90.767671 iter 30 value 86.057114 iter 40 value 84.028582 iter 50 value 83.172620 iter 60 value 81.412694 iter 70 value 79.929897 iter 80 value 79.096108 iter 90 value 78.793369 iter 100 value 78.550578 final value 78.550578 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 109.035679 iter 10 value 94.446050 iter 20 value 87.269684 iter 30 value 82.586201 iter 40 value 80.842128 iter 50 value 80.588946 iter 60 value 79.375435 iter 70 value 78.405280 iter 80 value 77.680198 iter 90 value 77.119841 iter 100 value 76.509683 final value 76.509683 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 103.632190 iter 10 value 94.485945 iter 20 value 89.553381 iter 30 value 84.850357 iter 40 value 81.554255 iter 50 value 79.122475 iter 60 value 77.952101 iter 70 value 77.845578 iter 80 value 77.792191 iter 90 value 77.634220 iter 100 value 77.082147 final value 77.082147 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 125.595553 iter 10 value 94.610374 iter 20 value 87.321353 iter 30 value 84.267002 iter 40 value 79.196391 iter 50 value 78.633576 iter 60 value 76.722455 iter 70 value 76.502353 iter 80 value 76.292191 iter 90 value 75.982079 iter 100 value 75.884413 final value 75.884413 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 111.168409 iter 10 value 94.365336 iter 20 value 83.729015 iter 30 value 80.582748 iter 40 value 80.245805 iter 50 value 78.871330 iter 60 value 77.223092 iter 70 value 76.830002 iter 80 value 76.483363 iter 90 value 76.429665 iter 100 value 76.367732 final value 76.367732 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 99.696400 final value 94.485731 converged Fitting Repeat 2 # weights: 103 initial value 100.558620 iter 10 value 94.313416 final value 94.309810 converged Fitting Repeat 3 # weights: 103 initial value 100.541297 final value 94.485909 converged Fitting Repeat 4 # weights: 103 initial value 106.326799 iter 10 value 94.486007 iter 20 value 94.484224 final value 94.484222 converged Fitting Repeat 5 # weights: 103 initial value 103.688034 final value 94.485779 converged Fitting Repeat 1 # weights: 305 initial value 96.337577 iter 10 value 94.489000 iter 20 value 94.484237 final value 94.484216 converged Fitting Repeat 2 # weights: 305 initial value 96.525426 iter 10 value 94.488845 iter 20 value 94.311560 iter 30 value 85.625827 iter 40 value 81.942218 iter 50 value 81.823469 iter 60 value 81.822436 iter 70 value 81.821195 iter 80 value 81.820816 iter 90 value 81.820550 iter 100 value 81.809811 final value 81.809811 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 95.321620 iter 10 value 94.149456 iter 20 value 93.825561 iter 30 value 87.830817 iter 40 value 86.899335 iter 50 value 86.425370 iter 60 value 86.424462 final value 86.424458 converged Fitting Repeat 4 # weights: 305 initial value 103.421791 iter 10 value 89.837873 iter 20 value 89.774594 iter 30 value 87.585755 iter 40 value 87.330726 iter 50 value 87.328459 iter 60 value 87.327487 iter 70 value 87.326545 iter 80 value 86.642901 iter 90 value 82.983630 iter 100 value 81.465857 final value 81.465857 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 107.091485 iter 10 value 94.360708 iter 20 value 93.824899 iter 30 value 86.157044 iter 40 value 86.064357 iter 50 value 84.880351 final value 84.483146 converged Fitting Repeat 1 # weights: 507 initial value 95.817537 iter 10 value 94.489702 iter 20 value 91.402979 iter 30 value 86.793004 iter 40 value 84.594115 iter 50 value 84.069410 iter 60 value 79.905459 iter 70 value 79.587641 final value 79.586370 converged Fitting Repeat 2 # weights: 507 initial value 113.177362 iter 10 value 94.362453 iter 20 value 94.335978 iter 30 value 93.943927 final value 93.931846 converged Fitting Repeat 3 # weights: 507 initial value 107.032269 iter 10 value 94.492265 iter 20 value 94.409310 iter 30 value 94.291667 iter 40 value 91.210270 iter 50 value 81.960691 iter 60 value 81.723972 iter 70 value 81.381197 iter 80 value 81.195942 iter 90 value 81.192878 iter 100 value 81.189756 final value 81.189756 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 107.926975 iter 10 value 94.304054 iter 20 value 92.307216 iter 30 value 84.870135 iter 40 value 82.629090 iter 50 value 82.611570 iter 60 value 82.609852 iter 70 value 82.606198 iter 80 value 82.122211 iter 90 value 80.268070 iter 100 value 78.126753 final value 78.126753 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 98.229021 iter 10 value 88.790383 iter 20 value 85.760009 iter 30 value 85.642391 iter 40 value 85.641094 iter 50 value 85.639839 iter 60 value 85.639561 iter 70 value 85.638228 iter 80 value 85.634144 iter 90 value 84.001606 iter 100 value 79.037391 final value 79.037391 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 124.115429 iter 10 value 117.896087 iter 20 value 117.861380 iter 30 value 115.941971 iter 40 value 110.963160 iter 50 value 108.183442 iter 60 value 104.713745 iter 70 value 103.396966 iter 80 value 103.338226 iter 90 value 103.319358 iter 100 value 103.159420 final value 103.159420 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 120.982930 iter 10 value 117.754728 iter 20 value 108.533879 iter 30 value 107.368240 iter 40 value 106.932249 iter 50 value 106.189242 iter 60 value 105.579472 iter 70 value 105.566339 iter 70 value 105.566339 iter 70 value 105.566339 final value 105.566339 converged Fitting Repeat 3 # weights: 103 initial value 125.796221 iter 10 value 117.989958 iter 20 value 117.894404 iter 30 value 117.617013 iter 40 value 108.031533 iter 50 value 107.281187 iter 60 value 105.254669 iter 70 value 103.114094 iter 80 value 102.607022 iter 90 value 102.565246 iter 100 value 102.559318 final value 102.559318 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 139.225353 iter 10 value 117.897974 iter 20 value 113.582420 iter 30 value 109.853091 iter 40 value 105.469287 iter 50 value 105.309376 iter 60 value 105.264411 iter 70 value 105.260185 iter 80 value 105.258334 iter 80 value 105.258333 iter 80 value 105.258333 final value 105.258333 converged Fitting Repeat 5 # weights: 103 initial value 120.806277 iter 10 value 117.894415 iter 20 value 117.713086 iter 30 value 117.558091 iter 40 value 108.694833 iter 50 value 107.705924 iter 60 value 107.464386 iter 70 value 106.236026 iter 80 value 103.219935 iter 90 value 102.912577 iter 100 value 102.614117 final value 102.614117 stopped after 100 iterations svmRadial ranger Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases RUNIT TEST PROTOCOL -- Thu Sep 12 06:03:21 2024 *********************************************** Number of test functions: 7 Number of errors: 0 Number of failures: 0 1 Test Suite : HPiP RUnit Tests - 7 test functions, 0 errors, 0 failures Number of test functions: 7 Number of errors: 0 Number of failures: 0 Warning messages: 1: `repeats` has no meaning for this resampling method. 2: executing %dopar% sequentially: no parallel backend registered > > > > > proc.time() user system elapsed 53.398 1.337 71.066
HPiP.Rcheck/HPiP-Ex.timings
name | user | system | elapsed | |
FSmethod | 38.269 | 0.523 | 38.864 | |
FreqInteractors | 0.293 | 0.008 | 0.301 | |
calculateAAC | 0.039 | 0.008 | 0.047 | |
calculateAutocor | 0.725 | 0.016 | 0.744 | |
calculateCTDC | 0.085 | 0.008 | 0.094 | |
calculateCTDD | 0.730 | 0.000 | 0.732 | |
calculateCTDT | 0.268 | 0.000 | 0.269 | |
calculateCTriad | 0.455 | 0.020 | 0.475 | |
calculateDC | 0.131 | 0.000 | 0.131 | |
calculateF | 0.427 | 0.016 | 0.444 | |
calculateKSAAP | 0.147 | 0.000 | 0.148 | |
calculateQD_Sm | 2.391 | 0.024 | 2.419 | |
calculateTC | 2.450 | 0.016 | 2.471 | |
calculateTC_Sm | 0.371 | 0.004 | 0.376 | |
corr_plot | 38.693 | 0.559 | 39.318 | |
enrichfindP | 0.510 | 0.036 | 20.096 | |
enrichfind_hp | 0.079 | 0.012 | 2.585 | |
enrichplot | 0.501 | 0.000 | 0.503 | |
filter_missing_values | 0.002 | 0.000 | 0.001 | |
getFASTA | 0.086 | 0.008 | 18.095 | |
getHPI | 0.000 | 0.000 | 0.001 | |
get_negativePPI | 0.001 | 0.000 | 0.002 | |
get_positivePPI | 0 | 0 | 0 | |
impute_missing_data | 0.002 | 0.000 | 0.001 | |
plotPPI | 0.077 | 0.004 | 0.081 | |
pred_ensembel | 18.421 | 0.325 | 16.369 | |
var_imp | 40.769 | 0.831 | 41.669 | |