pRoloc 1.16.1
Laurent Gatto
| Snapshot Date: 2017-10-17 17:00:52 -0400 (Tue, 17 Oct 2017) | | URL: https://git.bioconductor.org/packages/pRoloc | | Branch: RELEASE_3_5 | | Last Commit: 62abf44 | | Last Changed Date: 2017-05-05 15:32:27 -0400 (Fri, 05 May 2017) |
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | |  |
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | |
| veracruz2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
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### Running command:
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### rm -rf pRoloc.buildbin-libdir && mkdir pRoloc.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.5/bioc/src/contrib/pRoloc_1.16.1.tar.gz && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD INSTALL --build --library=pRoloc.buildbin-libdir --merge-multiarch pRoloc_1.16.1.tar.gz && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD INSTALL pRoloc_1.16.1.zip && rm pRoloc_1.16.1.tar.gz pRoloc_1.16.1.zip
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install for i386
* installing *source* package 'pRoloc' ...
** libs
C:/Rtools/mingw_32/bin/g++ -I"C:/Users/BIOCBU˜1/BBS-3˜1.5-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.5-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.5-bioc/R/library/RcppArmadillo/include" -I"C:/local323/include" -O2 -Wall -mtune=core2 -c pRoloc.cpp -o pRoloc.o
In file included from C:/Users/biocbuild/bbs-3.5-bioc/R/library/RcppArmadillo/include/armadillo:53:0,
from C:/Users/biocbuild/bbs-3.5-bioc/R/library/RcppArmadillo/include/RcppArmadilloForward.h:46,
from C:/Users/biocbuild/bbs-3.5-bioc/R/library/RcppArmadillo/include/RcppArmadillo.h:31,
from pRoloc.cpp:2:
C:/Users/biocbuild/bbs-3.5-bioc/R/library/RcppArmadillo/include/armadillo_bits/compiler_setup.hpp:474:96: note: #pragma message: WARNING: use of OpenMP disabled; this compiler doesn't support OpenMP 3.0+
#pragma message ("WARNING: use of OpenMP disabled; this compiler doesn't support OpenMP 3.0+")
^
C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o pRoloc.dll tmp.def pRoloc.o -LC:/Users/BIOCBU˜1/BBS-3˜1.5-B/R/bin/i386 -lRlapack -LC:/Users/BIOCBU˜1/BBS-3˜1.5-B/R/bin/i386 -lRblas -lgfortran -lm -lquadmath -LC:/local323/lib/i386 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.5-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.5-bioc/meat/pRoloc.buildbin-libdir/pRoloc/libs/i386
** R
** data
** inst
** preparing package for lazy loading
Warning: replacing previous import 'BiocGenerics::var' by 'stats::var' when loading 'MLInterfaces'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: replacing previous import 'BiocGenerics::var' by 'stats::var' when loading 'MLInterfaces'
install for x64
* installing *source* package 'pRoloc' ...
** libs
C:/Rtools/mingw_64/bin/g++ -I"C:/Users/BIOCBU˜1/BBS-3˜1.5-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.5-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.5-bioc/R/library/RcppArmadillo/include" -I"C:/local323/include" -O2 -Wall -mtune=core2 -c pRoloc.cpp -o pRoloc.o
In file included from C:/Users/biocbuild/bbs-3.5-bioc/R/library/RcppArmadillo/include/armadillo:53:0,
from C:/Users/biocbuild/bbs-3.5-bioc/R/library/RcppArmadillo/include/RcppArmadilloForward.h:46,
from C:/Users/biocbuild/bbs-3.5-bioc/R/library/RcppArmadillo/include/RcppArmadillo.h:31,
from pRoloc.cpp:2:
C:/Users/biocbuild/bbs-3.5-bioc/R/library/RcppArmadillo/include/armadillo_bits/compiler_setup.hpp:474:96: note: #pragma message: WARNING: use of OpenMP disabled; this compiler doesn't support OpenMP 3.0+
#pragma message ("WARNING: use of OpenMP disabled; this compiler doesn't support OpenMP 3.0+")
^
C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o pRoloc.dll tmp.def pRoloc.o -LC:/Users/BIOCBU˜1/BBS-3˜1.5-B/R/bin/x64 -lRlapack -LC:/Users/BIOCBU˜1/BBS-3˜1.5-B/R/bin/x64 -lRblas -lgfortran -lm -lquadmath -LC:/local323/lib/x64 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.5-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.5-bioc/meat/pRoloc.buildbin-libdir/pRoloc/libs/x64
** testing if installed package can be loaded
Warning: replacing previous import 'BiocGenerics::var' by 'stats::var' when loading 'MLInterfaces'
* MD5 sums
packaged installation of 'pRoloc' as pRoloc_1.16.1.zip
* DONE (pRoloc)
* installing to library 'C:/Users/biocbuild/bbs-3.5-bioc/R/library'
package 'pRoloc' successfully unpacked and MD5 sums checked