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BioC 3.5: CHECK report for GenVisR on oaxaca

This page was generated on 2017-03-04 16:51:35 -0500 (Sat, 04 Mar 2017).

Package 530/1339HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GenVisR 1.4.1
Zachary Skidmore
Snapshot Date: 2017-03-03 17:15:47 -0500 (Fri, 03 Mar 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/GenVisR
Last Changed Rev: 125040 / Revision: 127142
Last Changed Date: 2016-12-12 13:58:59 -0500 (Mon, 12 Dec 2016)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  NotNeeded  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository
toluca2 Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK [ ERROR ] OK 

Summary

Package: GenVisR
Version: 1.4.1
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings GenVisR_1.4.1.tar.gz
StartedAt: 2017-03-04 03:37:56 -0800 (Sat, 04 Mar 2017)
EndedAt: 2017-03-04 03:38:02 -0800 (Sat, 04 Mar 2017)
EllapsedTime: 5.5 seconds
RetCode: 1
Status:  ERROR 
CheckDir: GenVisR.Rcheck
Warnings: NA

Command output

##############################################################################
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###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings GenVisR_1.4.1.tar.gz
###
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* using log directory ‘/Users/biocbuild/bbs-3.5-bioc/meat/GenVisR.Rcheck’
* using R Under development (unstable) (2017-02-15 r72177)
* using platform: x86_64-apple-darwin13.4.0 (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘GenVisR/DESCRIPTION’ ... OK
* this is package ‘GenVisR’ version ‘1.4.1’
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package suggested but not available: ‘RMySQL’

The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE

Status: 1 ERROR
See
  ‘/Users/biocbuild/bbs-3.5-bioc/meat/GenVisR.Rcheck/00check.log’
for details.