Johannes Griss
| Snapshot Date: 2025-07-17 13:40 -0400 (Thu, 17 Jul 2025) |
| git_url: https://git.bioconductor.org/packages/ReactomeGSA |
| git_branch: RELEASE_3_21 |
| git_last_commit: 6e8adbb |
| git_last_commit_date: 2025-04-15 11:49:59 -0400 (Tue, 15 Apr 2025) |
| Back to Multiple platform build/check report for BioC 3.21: simplified long |
|
This page was generated on 2025-07-21 11:42 -0400 (Mon, 21 Jul 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.2 LTS) | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 4821 |
| palomino7 | Windows Server 2022 Datacenter | x64 | 4.5.1 (2025-06-13 ucrt) -- "Great Square Root" | 4563 |
| merida1 | macOS 12.7.5 Monterey | x86_64 | 4.5.1 RC (2025-06-05 r88288) -- "Great Square Root" | 4601 |
| kjohnson1 | macOS 13.6.6 Ventura | arm64 | 4.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" | 4542 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1728/2341 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| ReactomeGSA 1.22.0 (landing page) Johannes Griss
| nebbiolo1 | Linux (Ubuntu 24.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino7 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 12.7.5 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson1 | macOS 13.6.6 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
|
To the developers/maintainers of the ReactomeGSA package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ReactomeGSA.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: ReactomeGSA |
| Version: 1.22.0 |
| Command: rm -rf ReactomeGSA.buildbin-libdir && mkdir ReactomeGSA.buildbin-libdir && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD INSTALL --build --library=ReactomeGSA.buildbin-libdir ReactomeGSA_1.22.0.tar.gz |
| StartedAt: 2025-07-18 09:59:34 -0400 (Fri, 18 Jul 2025) |
| EndedAt: 2025-07-18 10:01:12 -0400 (Fri, 18 Jul 2025) |
| EllapsedTime: 97.7 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: ReactomeGSA_1.22.0.zip |
| PackageFileSize: 529.5 KiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf ReactomeGSA.buildbin-libdir && mkdir ReactomeGSA.buildbin-libdir && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD INSTALL --build --library=ReactomeGSA.buildbin-libdir ReactomeGSA_1.22.0.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'ReactomeGSA' ... ** this is package 'ReactomeGSA' version '1.22.0' ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading in method for 'analyse_sc_clusters' with signature 'object="Seurat"': no definition for class "Seurat" in method for 'analyse_sc_clusters' with signature 'object="SingleCellExperiment"': no definition for class "SingleCellExperiment" in method for 'add_dataset' with signature 'request="ReactomeAnalysisRequest",expression_values="EList"': no definition for class "EList" in method for 'add_dataset' with signature 'request="ReactomeAnalysisRequest",expression_values="DGEList"': no definition for class "DGEList" in method for 'generate_pseudo_bulk_data' with signature 'object="Seurat"': no definition for class "Seurat" in method for 'generate_pseudo_bulk_data' with signature 'object="SingleCellExperiment"': no definition for class "SingleCellExperiment" ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'ReactomeGSA' as ReactomeGSA_1.22.0.zip * DONE (ReactomeGSA)