Back to the "Multiple platform build/check report" A  B  C  D  E  F [G] H  I  J  K  L  M  N  O  P  Q  R  S  T  U  V  W  X  Y  Z 

BioC 3.2: BUILD report for genomation on oaxaca

This page was generated on 2015-10-27 17:41:58 -0400 (Tue, 27 Oct 2015).

Package 416/1104HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
genomation 1.2.0
Altuna Akalin , Vedran Franke
Snapshot Date: 2015-10-26 19:24:07 -0400 (Mon, 26 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/genomation
Last Changed Rev: 109589 / Revision: 109947
Last Changed Date: 2015-10-13 15:36:05 -0400 (Tue, 13 Oct 2015)
linux1.bioconductor.org Linux (Ubuntu 14.04.2 LTS) / x86_64  OK  ERROR  skipped 
windows1.bioconductor.org Windows Server 2012 R2 Enterprise SP1 (64-bit) / x64  OK  ERROR  skipped  skipped 
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK [ ERROR ] skipped  skipped 

Summary

Package: genomation
Version: 1.2.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data genomation
StartedAt: 2015-10-26 23:49:29 -0400 (Mon, 26 Oct 2015)
EndedAt: 2015-10-26 23:50:04 -0400 (Mon, 26 Oct 2015)
EllapsedTime: 34.6 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data genomation
###
##############################################################################
##############################################################################


* checking for file ‘genomation/DESCRIPTION’ ... OK
* preparing ‘genomation’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
Quitting from lines 329-338 (GenomationManual-knitr.Rmd) 
Error: processing vignette 'GenomationManual-knitr.Rmd' failed with diagnostics:
strand values must be in '+' '-' '*'
Execution halted