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BioC 3.2: INSTALL report for DiffBind on windows1.bioconductor.org

This page was generated on 2015-10-27 17:29:41 -0400 (Tue, 27 Oct 2015).

Package 274/1104HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DiffBind 1.16.0
Rory Stark
Snapshot Date: 2015-10-26 19:24:07 -0400 (Mon, 26 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/DiffBind
Last Changed Rev: 109589 / Revision: 109947
Last Changed Date: 2015-10-13 15:36:05 -0400 (Tue, 13 Oct 2015)
linux1.bioconductor.org Linux (Ubuntu 14.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
windows1.bioconductor.org Windows Server 2012 R2 Enterprise SP1 (64-bit) / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: DiffBind
Version: 1.16.0
Command: C:\cygwin64\bin\curl.exe -O http://linux1.bioconductor.org/BBS/3.2/bioc/src/contrib/DiffBind_1.16.0.tar.gz && C:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch DiffBind_1.16.0.tar.gz && rm DiffBind_1.16.0.tar.gz
StartedAt: 2015-10-26 20:15:20 -0400 (Mon, 26 Oct 2015)
EndedAt: 2015-10-26 20:16:33 -0400 (Mon, 26 Oct 2015)
EllapsedTime: 72.5 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin64\bin\curl.exe -O http://linux1.bioconductor.org/BBS/3.2/bioc/src/contrib/DiffBind_1.16.0.tar.gz && C:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch DiffBind_1.16.0.tar.gz && rm DiffBind_1.16.0.tar.gz
###
##############################################################################
##############################################################################


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100 1408k  100 1408k    0     0  81.6M      0 --:--:-- --:--:-- --:--:--  105M

install for i386

* installing to library 'C:/biocbld/bbs-3.2-bioc/R/library'
* installing *source* package 'DiffBind' ...
** libs
g++ -m32 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c bamReader.cpp -o bamReader.o
bamReader.cpp: In member function 'bool bode::BamReader::isBam(const string&)':
bamReader.cpp:14:7: warning: variable 'rd' set but not used [-Wunused-but-set-variable]
g++ -m32 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c bedReader.cpp -o bedReader.o
g++ -m32 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c bitBucket.cpp -o bitBucket.o
g++ -m32 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c croi_func.cpp -o croi_func.o
g++ -m32 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c croi_main.cpp -o croi_main.o
g++ -m32 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c densitySet.cpp -o densitySet.o
g++ -m32 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c iBucket.cpp -o iBucket.o
g++ -m32 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c interval.cpp -o interval.o
g++ -m32 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c intervalDensity.cpp -o intervalDensity.o
g++ -m32 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c intervalNode.cpp -o intervalNode.o
g++ -m32 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c intervalSet.cpp -o intervalSet.o
g++ -m32 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c intervalTree.cpp -o intervalTree.o
gcc -m32 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c mergeOne.c -o mergeOne.o
mergeOne.c: In function 'mo_mergeTwo':
mergeOne.c:351:7: warning: variable 'keepAll' set but not used [-Wunused-but-set-variable]
g++ -m32 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c nodeGroup.cpp -o nodeGroup.o
g++ -m32 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c reader.cpp -o reader.o
g++ -m32 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c sequence.cpp -o sequence.o
g++ -m32 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c util.cpp -o util.o
g++ -m32 -shared -s -static-libgcc -o DiffBind.dll tmp.def bamReader.o bedReader.o bitBucket.o croi_func.o croi_main.o densitySet.o iBucket.o interval.o intervalDensity.o intervalNode.o intervalSet.o intervalTree.o mergeOne.o nodeGroup.o reader.o sequence.o util.o C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/usrlib/i386/libbam.a C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/usrlib/i386/libbam.a C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/usrlib/i386/libbcf.a C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/usrlib/i386/libtabix.a -lws2_32 -pthread -LC:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/libs/i386 -lzlib1bioc -Ld:/RCompile/r-compiling/local/local320/lib/i386 -Ld:/RCompile/r-compiling/local/local320/lib -LC:/biocbld/BBS-3˜1.2-B/R/bin/i386 -lR
installing to C:/biocbld/bbs-3.2-bioc/R/library/DiffBind/libs/i386
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing to library 'C:/biocbld/bbs-3.2-bioc/R/library'
* installing *source* package 'DiffBind' ...
** libs
g++ -m64 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c bamReader.cpp -o bamReader.o
bamReader.cpp: In member function 'bool bode::BamReader::isBam(const string&)':
bamReader.cpp:14:7: warning: variable 'rd' set but not used [-Wunused-but-set-variable]
g++ -m64 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c bedReader.cpp -o bedReader.o
g++ -m64 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c bitBucket.cpp -o bitBucket.o
g++ -m64 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c croi_func.cpp -o croi_func.o
g++ -m64 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c croi_main.cpp -o croi_main.o
g++ -m64 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c densitySet.cpp -o densitySet.o
g++ -m64 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c iBucket.cpp -o iBucket.o
g++ -m64 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c interval.cpp -o interval.o
g++ -m64 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c intervalDensity.cpp -o intervalDensity.o
g++ -m64 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c intervalNode.cpp -o intervalNode.o
g++ -m64 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c intervalSet.cpp -o intervalSet.o
g++ -m64 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c intervalTree.cpp -o intervalTree.o
gcc -m64 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c mergeOne.c -o mergeOne.o
mergeOne.c: In function 'mo_mergeTwo':
mergeOne.c:351:7: warning: variable 'keepAll' set but not used [-Wunused-but-set-variable]
g++ -m64 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c nodeGroup.cpp -o nodeGroup.o
g++ -m64 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c reader.cpp -o reader.o
g++ -m64 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c sequence.cpp -o sequence.o
g++ -m64 -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include" -I"C:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"C:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/include"   -I"C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c util.cpp -o util.o
g++ -m64 -shared -s -static-libgcc -o DiffBind.dll tmp.def bamReader.o bedReader.o bitBucket.o croi_func.o croi_main.o densitySet.o iBucket.o interval.o intervalDensity.o intervalNode.o intervalSet.o intervalTree.o mergeOne.o nodeGroup.o reader.o sequence.o util.o C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/usrlib/x64/libbam.a C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/usrlib/x64/libbam.a C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/usrlib/x64/libbcf.a C:/biocbld/bbs-3.2-bioc/R/library/Rsamtools/usrlib/x64/libtabix.a -lws2_32 -pthread -LC:/biocbld/bbs-3.2-bioc/R/library/zlibbioc/libs/x64 -lzlib1bioc -Ld:/RCompile/r-compiling/local/local320/lib/x64 -Ld:/RCompile/r-compiling/local/local320/lib -LC:/biocbld/BBS-3˜1.2-B/R/bin/x64 -lR
installing to C:/biocbld/bbs-3.2-bioc/R/library/DiffBind/libs/x64
** testing if installed package can be loaded
* DONE (DiffBind)