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BioC 3.2: BUILD BIN report for xps on moscato1

This page was generated on 2015-08-20 13:18:52 -0700 (Thu, 20 Aug 2015).

Package 1066/1069HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
xps 1.29.0
Christian Stratowa
Snapshot Date: 2015-08-19 16:24:33 -0700 (Wed, 19 Aug 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/xps
Last Changed Rev: 102594 / Revision: 107602
Last Changed Date: 2015-04-16 13:02:44 -0700 (Thu, 16 Apr 2015)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  OK  OK UNNEEDED, same version exists in internal repository
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  NotNeeded  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: xps
Version: 1.29.0
Command: rm -rf xps.buildbin-libdir && mkdir xps.buildbin-libdir && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe --arch i386 CMD INSTALL --build --no-multiarch --library=xps.buildbin-libdir xps_1.29.0.tar.gz
StartedAt: 2015-08-20 12:41:31 -0700 (Thu, 20 Aug 2015)
EndedAt: 2015-08-20 12:44:03 -0700 (Thu, 20 Aug 2015)
EllapsedTime: 152.0 seconds
RetCode: 0
Status:  OK  
PackageFile: xps_1.29.0.zip
PackageFileSize: 6.07 MiB

Command output

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###
### Running command:
###
###   rm -rf xps.buildbin-libdir && mkdir xps.buildbin-libdir && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe --arch i386 CMD INSTALL --build --no-multiarch --library=xps.buildbin-libdir xps_1.29.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'xps' ...
testing for presence of ROOT...
   found root.exe of ROOT in directory C:\root/bin...OK
** libs
  running 'src/Makefile.win' ...
g++ -pipe -mwindows  -IC:/root/include -include w32pragma.h -O2 -DWIN32 -c TMLMath.cxx
TMLMath.cxx:1109:0: warning: "xmax" redefined [enabled by default]
TMLMath.cxx:1060:0: note: this is the location of the previous definition
g++ -pipe -mwindows  -IC:/root/include -FIw32pragma.h   -O3 -DWIN32 -c TStat.cxx
g++ -pipe -mwindows  -IC:/root/include -FIw32pragma.h   -O3 -DWIN32 -c StatUtils.cxx
g++ -pipe -mwindows  -IC:/root/include -FIw32pragma.h   -O3 -DWIN32 -c XPSBase.cxx
g++ -pipe -mwindows  -IC:/root/include -FIw32pragma.h   -O3 -DWIN32 -c XPSUtils.cxx
g++ -pipe -mwindows  -IC:/root/include -FIw32pragma.h   -O3 -DWIN32 -c XPSSchemes.cxx
g++ -pipe -mwindows  -IC:/root/include -FIw32pragma.h   -O3 -DWIN32 -c XPSDataTypes.cxx
g++ -pipe -mwindows  -IC:/root/include -FIw32pragma.h   -O3 -DWIN32 -c XPSProjectHandler.cxx
g++ -pipe -mwindows  -IC:/root/include -FIw32pragma.h   -O3 -DWIN32 -c XPSData.cxx
g++ -pipe -mwindows  -IC:/root/include -FIw32pragma.h   -O3 -DWIN32 -c XPSProcessing.cxx
g++ -pipe -mwindows  -IC:/root/include -FIw32pragma.h   -O3 -DWIN32 -c XPSHybridizer.cxx
g++ -pipe -mwindows  -IC:/root/include -FIw32pragma.h   -O3 -DWIN32 -c XPSSelector.cxx
g++ -pipe -mwindows  -IC:/root/include -FIw32pragma.h   -O3 -DWIN32 -c XPSNormalizer.cxx
g++ -pipe -mwindows  -IC:/root/include -FIw32pragma.h   -O3 -DWIN32 -c XPSPreProcessing.cxx
g++ -pipe -mwindows  -IC:/root/include -FIw32pragma.h   -O3 -DWIN32 -c XPSNormation.cxx
g++ -pipe -mwindows  -IC:/root/include -FIw32pragma.h   -O3 -DWIN32 -c XPSFilter.cxx
g++ -pipe -mwindows  -IC:/root/include -FIw32pragma.h   -O3 -DWIN32 -c XPSAnalyzer.cxx
g++ -pipe -mwindows  -IC:/root/include -FIw32pragma.h   -O3 -DWIN32 -c XPSAnalysis.cxx
g++ -pipe -mwindows  -IC:/root/include -FIw32pragma.h   -O3 -DWIN32 -c rwrapper.cxx
Generating dictionary xpsDict.cxx...
#@rootcint -f xpsDict.cxx -c TMLMath.h TStat.h StatUtils.h XPSBase.h XPSUtils.h XPSSchemes.h XPSDataTypes.h XPSProjectHandler.h XPSData.h XPSProcessing.h XPSHybridizer.h XPSSelector.h XPSNormalizer.h XPSPreProcessing.h XPSNormation.h XPSFilter.h XPSAnalyzer.h XPSAnalysis.h rwrapper.h xpsLinkDef.h
C:/root/cint\cint\include\stdfunc.dll: Access is denied.

C:/root/cint\cint\stl\vector.dll: Access is denied.

C:/root/cint\cint\stl\vectorbool.dll: Access is denied.

C:/root/cint\cint\include\stdfunc.dll: Access is denied.

C:/root/cint\cint\include\stdcxxfunc.dll: Access is denied.

C:/root/cint\cint\include\stdfunc.dll: Access is denied.

C:/root/cint\cint\stl\map.dll: Access is denied.

C:/root/cint\cint\stl\map2.dll: Access is denied.

C:/root/cint\cint\stl\multimap.dll: Access is denied.

C:/root/cint\cint\stl\multimap2.dll: Access is denied.

g++ -pipe -mwindows  -IC:/root/include -include w32pragma.h -O3 -DWIN32 -c xpsDict.cxx
g++ -o xps.dll -mwindows -Wl,--subsystem,windows -Wl,--dll -shared  *.o "C:/root/lib/libCore.lib" "C:/root/lib/libCint.lib" "C:/root/lib/libHist.lib" "C:/root/lib/libGraf.lib" "C:/root/lib/libGraf3d.lib" "C:/root/lib/libGpad.lib" "C:/root/lib/libTree.lib" "C:/root/lib/libRint.lib" "C:/root/lib/libPostscript.lib" "C:/root/lib/libMatrix.lib" "C:/root/lib/libPhysics.lib" "C:/root/lib/libNet.lib" "C:/root/lib/libRIO.lib" "C:/root/lib/libMathCore.lib" "C:/root/lib/libGui.lib" "C:/root/lib/libGraf.lib" "C:/root/lib/libGpad.lib" "C:/root/lib/libGed.lib" "C:/root/lib/libTreePlayer.lib" "C:/root/lib/libTreeViewer.lib"
installing to D:/biocbld/bbs-3.2-bioc/meat/xps.buildbin-libdir/xps/libs/i386
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'xps' as xps_1.29.0.zip
* DONE (xps)