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This page was generated on 2024-06-28 17:42 -0400 (Fri, 28 Jun 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_644.4.0 (2024-04-24) -- "Puppy Cup" 4760
palomino3Windows Server 2022 Datacenterx644.4.0 (2024-04-24 ucrt) -- "Puppy Cup" 4494
merida1macOS 12.7.4 Montereyx86_644.4.0 (2024-04-24) -- "Puppy Cup" 4508
kjohnson1macOS 13.6.6 Venturaarm644.4.0 (2024-04-24) -- "Puppy Cup" 4466
palomino7Windows Server 2022 Datacenterx644.4.1 (2024-06-14 ucrt) -- "Race for Your Life" 4362
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1956/2300HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SGCP 1.4.0  (landing page)
Niloofar AghaieAbiane
Snapshot Date: 2024-06-26 14:00 -0400 (Wed, 26 Jun 2024)
git_url: https://git.bioconductor.org/packages/SGCP
git_branch: RELEASE_3_19
git_last_commit: b7e7662
git_last_commit_date: 2024-04-30 11:46:28 -0400 (Tue, 30 Apr 2024)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    ERROR  skipped
palomino3Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
merida1macOS 12.7.4 Monterey / x86_64  OK    ERROR  skippedskipped
kjohnson1macOS 13.6.6 Ventura / arm64  OK    ERROR  skippedskipped
palomino7Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped

BUILD results for SGCP on palomino3

To the developers/maintainers of the SGCP package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SGCP.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: SGCP
Version: 1.4.0
Command: chmod a+r SGCP -R && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data SGCP
StartedAt: 2024-06-26 21:55:49 -0400 (Wed, 26 Jun 2024)
EndedAt: 2024-06-26 21:57:26 -0400 (Wed, 26 Jun 2024)
EllapsedTime: 97.3 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   chmod a+r SGCP -R && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data SGCP
###
##############################################################################
##############################################################################


* checking for file 'SGCP/DESCRIPTION' ... OK
* preparing 'SGCP':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'SGCP.Rmd' using rmarkdown

Quitting from lines 411-413 [unnamed-chunk-7] (SGCP.Rmd)
Error: processing vignette 'SGCP.Rmd' failed with diagnostics:
Problem while computing aesthetics.
ℹ Error occurred in the 1st layer.
Caused by error in `scales_add_defaults()`:
! could not find function "scales_add_defaults"
--- failed re-building 'SGCP.Rmd'

SUMMARY: processing the following file failed:
  'SGCP.Rmd'

Error: Vignette re-building failed.
Execution halted