Back to Mac ARM64 build report for BioC 3.17
ABCDEFGHIJKLM[N]OPQRSTUVWXYZ

This page was generated on 2023-10-20 09:38:07 -0400 (Fri, 20 Oct 2023).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson2macOS 12.6.1 Montereyarm644.3.1 (2023-06-16) -- "Beagle Scouts" 4347
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1373/2230HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
netboxr 1.12.0  (landing page)
Eirc Minwei Liu
Snapshot Date: 2023-10-15 14:00:07 -0400 (Sun, 15 Oct 2023)
git_url: https://git.bioconductor.org/packages/netboxr
git_branch: RELEASE_3_17
git_last_commit: df2523f
git_last_commit_date: 2023-04-25 11:14:18 -0400 (Tue, 25 Apr 2023)
kjohnson2macOS 12.6.1 Monterey / arm64  OK    OK    ERROR    OK  

CHECK results for netboxr on kjohnson2


To the developers/maintainers of the netboxr package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: netboxr
Version: 1.12.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:netboxr.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings netboxr_1.12.0.tar.gz
StartedAt: 2023-10-18 11:14:32 -0400 (Wed, 18 Oct 2023)
EndedAt: 2023-10-18 11:14:38 -0400 (Wed, 18 Oct 2023)
EllapsedTime: 5.6 seconds
RetCode: 1
Status:   ERROR  
CheckDir: netboxr.Rcheck
Warnings: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:netboxr.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings netboxr_1.12.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/Users/biocbuild/bbs-3.17-bioc-mac-arm64/meat/netboxr.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: aarch64-apple-darwin20 (64-bit)
* R was compiled by
    Apple clang version 14.0.0 (clang-1400.0.29.202)
    GNU Fortran (GCC) 12.2.0
* running under: macOS Monterey 12.6.7
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘netboxr/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘netboxr’ version ‘1.12.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package suggested but not available: ‘cgdsr’

The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE

Status: 1 ERROR
See
  ‘/Users/biocbuild/bbs-3.17-bioc-mac-arm64/meat/netboxr.Rcheck/00check.log’
for details.


Installation output


Tests output


Example timings