Christopher Bare
| Snapshot Date: 2023-10-15 14:00:07 -0400 (Sun, 15 Oct 2023) |
| git_url: https://git.bioconductor.org/packages/gaggle |
| git_branch: RELEASE_3_17 |
| git_last_commit: 84eedb6 |
| git_last_commit_date: 2023-04-25 09:43:51 -0400 (Tue, 25 Apr 2023) |
| Back to Mac ARM64 build report for BioC 3.17 |
|
This page was generated on 2023-10-20 09:38:02 -0400 (Fri, 20 Oct 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| kjohnson2 | macOS 12.6.1 Monterey | arm64 | 4.3.1 (2023-06-16) -- "Beagle Scouts" | 4347 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 752/2230 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| gaggle 1.68.0 (landing page) Christopher Bare
| kjohnson2 | macOS 12.6.1 Monterey / arm64 | OK | OK | OK | OK | | |||||||
|
To the developers/maintainers of the gaggle package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: gaggle |
| Version: 1.68.0 |
| Command: rm -rf gaggle.buildbin-libdir && mkdir gaggle.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh gaggle_1.68.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R gaggle.buildbin-libdir |
| StartedAt: 2023-10-19 13:29:48 -0400 (Thu, 19 Oct 2023) |
| EndedAt: 2023-10-19 13:30:00 -0400 (Thu, 19 Oct 2023) |
| EllapsedTime: 11.8 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: gaggle_1.68.0.tgz |
| PackageFileSize: 303.1 KiB |
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### Running command:
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### rm -rf gaggle.buildbin-libdir && mkdir gaggle.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh gaggle_1.68.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R gaggle.buildbin-libdir
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>>>>>>>
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=gaggle.buildbin-libdir gaggle_1.68.0.tar.gz'
>>>>>>>
* installing *source* package ‘gaggle’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
onLoad -- libname: /Users/biocbuild/bbs-3.17-bioc-mac-arm64/meat/gaggle.buildbin-libdir/00LOCK-gaggle/00new pkgname: gaggle
path to jar: /Users/biocbuild/bbs-3.17-bioc-mac-arm64/meat/gaggle.buildbin-libdir/00LOCK-gaggle/00new/gaggle/jars/gaggleRShell.jar
script: gaggle.R $Revision: 4499 $ $Date: 2010-08-10 17:15:03 -0700 (Tue, 10 Aug 2010) $
os version: Mac OS X
jvm version: 18.0.1.1
You are using the wrong version of Java.
Please see http://gaggle.systemsbiology.org/docs/html/java
** testing if installed package can be loaded from final location
onLoad -- libname: /Users/biocbuild/bbs-3.17-bioc-mac-arm64/meat/gaggle.buildbin-libdir pkgname: gaggle
path to jar: /Users/biocbuild/bbs-3.17-bioc-mac-arm64/meat/gaggle.buildbin-libdir/gaggle/jars/gaggleRShell.jar
script: gaggle.R $Revision: 4499 $ $Date: 2010-08-10 17:15:03 -0700 (Tue, 10 Aug 2010) $
os version: Mac OS X
jvm version: 18.0.1.1
You are using the wrong version of Java.
Please see http://gaggle.systemsbiology.org/docs/html/java
** testing if installed package keeps a record of temporary installation path
* DONE (gaggle)