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This page was generated on 2023-10-20 09:38:05 -0400 (Fri, 20 Oct 2023).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson2macOS 12.6.1 Montereyarm644.3.1 (2023-06-16) -- "Beagle Scouts" 4347
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1065/2230HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
LineagePulse 1.20.0  (landing page)
David S Fischer
Snapshot Date: 2023-10-15 14:00:07 -0400 (Sun, 15 Oct 2023)
git_url: https://git.bioconductor.org/packages/LineagePulse
git_branch: RELEASE_3_17
git_last_commit: d7ae0db
git_last_commit_date: 2023-04-25 10:58:25 -0400 (Tue, 25 Apr 2023)
kjohnson2macOS 12.6.1 Monterey / arm64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

BUILD BIN results for LineagePulse on kjohnson2


To the developers/maintainers of the LineagePulse package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: LineagePulse
Version: 1.20.0
Command: rm -rf LineagePulse.buildbin-libdir && mkdir LineagePulse.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh LineagePulse_1.20.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R LineagePulse.buildbin-libdir
StartedAt: 2023-10-19 14:24:26 -0400 (Thu, 19 Oct 2023)
EndedAt: 2023-10-19 14:25:40 -0400 (Thu, 19 Oct 2023)
EllapsedTime: 74.9 seconds
RetCode: 0
Status:   OK  
PackageFile: LineagePulse_1.20.0.tgz
PackageFileSize: 756.8 KiB

Command output

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###
### Running command:
###
###   rm -rf LineagePulse.buildbin-libdir && mkdir LineagePulse.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh LineagePulse_1.20.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R LineagePulse.buildbin-libdir
###
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>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=LineagePulse.buildbin-libdir LineagePulse_1.20.0.tar.gz'
>>>>>>> 

* installing *source* package ‘LineagePulse’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Note: possible error in 'evalLogLikGeneMM(vecCounts = vecCounts, ': unused arguments (matDispParam = matDispParam, matDropParam = matDropParam, matWeights = matWeights) 
Note: possible error in 'evalLogLikGeneMM(vecCounts = vecCounts, ': unused arguments (matDispParam = do.call(cbind, lapply(seq_len(ncol(matWeights)), function(m) vecDispParam)), matDropParam = do.call(cbind, lapply(seq_len(ncol(matWeights)), function(m) vecPiParam)), matWeights = matWeights) 
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (LineagePulse)