Sean Davis
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/methylumi |
| git_branch: RELEASE_3_14 |
| git_last_commit: 2110392 |
| git_last_commit_date: 2021-10-30 09:58:54 -0400 (Sat, 30 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:06:53 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the methylumi package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/methylumi.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1129/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| methylumi 2.40.1 (landing page) Sean Davis
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: methylumi |
| Version: 2.40.1 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/methylumi_2.40.1.tar.gz && rm -rf methylumi.buildbin-libdir && mkdir methylumi.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=methylumi.buildbin-libdir methylumi_2.40.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL methylumi_2.40.1.zip && rm methylumi_2.40.1.tar.gz methylumi_2.40.1.zip |
| StartedAt: 2022-04-12 07:07:09 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 07:10:27 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 198.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/methylumi_2.40.1.tar.gz && rm -rf methylumi.buildbin-libdir && mkdir methylumi.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=methylumi.buildbin-libdir methylumi_2.40.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL methylumi_2.40.1.zip && rm methylumi_2.40.1.tar.gz methylumi_2.40.1.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
0 5616k 0 44359 0 0 281k 0 0:00:19 --:--:-- 0:00:19 281k
25 5616k 25 1455k 0 0 1263k 0 0:00:04 0:00:01 0:00:03 1263k
66 5616k 66 3747k 0 0 1744k 0 0:00:03 0:00:02 0:00:01 1744k
100 5616k 100 5616k 0 0 1995k 0 0:00:02 0:00:02 --:--:-- 1996k
install for i386
* installing *source* package 'methylumi' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'methylumi'
finding HTML links ... done
CpGs html
IDATsToMatrices html
IDATtoMatrix html
MethyLumi-class html
finding level-2 HTML links ... done
MethyLumiM-class html
MethyLumiQC-class html
MethyLumiSet-class html
estimateM html
extractBarcodeAndPosition html
featureFilter html
generics html
getAssayDataNameSubstitutions html
methylData-class html
methylumIDAT html
methylumi-package html
methylumiGenerics html
methylumiR html
mldat html
normalizeMethyLumiSet html
plotSampleIntensities html
qcplot html
stripBeadExtras html
tcgaPipeline html
varFilter html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'methylumi' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'methylumi' as methylumi_2.40.1.zip
* DONE (methylumi)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'methylumi' successfully unpacked and MD5 sums checked