| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:06:39 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the glmSparseNet package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/glmSparseNet.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 789/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| glmSparseNet 1.12.0 (landing page) André Veríssimo
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | ERROR | skipped | skipped | |||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | ERROR | skipped | skipped | |||||||||
| Package: glmSparseNet |
| Version: 1.12.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/glmSparseNet_1.12.0.tar.gz && rm -rf glmSparseNet.buildbin-libdir && mkdir glmSparseNet.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=glmSparseNet.buildbin-libdir glmSparseNet_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL glmSparseNet_1.12.0.zip && rm glmSparseNet_1.12.0.tar.gz glmSparseNet_1.12.0.zip |
| StartedAt: 2022-04-12 07:24:44 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 07:26:13 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 89.4 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/glmSparseNet_1.12.0.tar.gz && rm -rf glmSparseNet.buildbin-libdir && mkdir glmSparseNet.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=glmSparseNet.buildbin-libdir glmSparseNet_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL glmSparseNet_1.12.0.zip && rm glmSparseNet_1.12.0.tar.gz glmSparseNet_1.12.0.zip
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install for i386
* installing *source* package 'glmSparseNet' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'glmSparseNet'
finding HTML links ... done
biomart.load html
buildLambda html
buildStringNetwork html
calculate.combined.score html
curl.workaround html
cv.glmDegree html
cv.glmHub html
cv.glmOrphan html
cv.glmSparseNet html
degreeCor html
degreeCov html
degreeSparsebn html
dot-calcPenalty html
dot-degreeGeneric html
dot-glmSparseNetPrivate html
dot-networkGenericParallel html
dot-networkWorker html
downloadFileLocal html
ensemblGeneNames html
geneNames html
glmDegree html
glmHub html
glmOrphan html
glmSparseNet html
hallmarks html
heuristicScale html
hubHeuristic html
networkCorParallel html
networkCovParallel html
networkOptions html
orphanHeuristic html
protein2EnsemblGeneNames html
separate2GroupsCox html
string.network.700.cache html
stringDBhomoSapiens html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'glmSparseNet' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'glmSparseNet' as glmSparseNet_1.12.0.zip
* DONE (glmSparseNet)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'glmSparseNet' successfully unpacked and MD5 sums checked