This page was generated on 2022-04-13 12:07:28 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up"
| 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up"
| 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up"
| 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
INSTALL results for TFutils on tokay2
raw results
| TFutils 1.14.0 (landing page)
Vincent Carey
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/TFutils |
| git_branch: RELEASE_3_14 |
| git_last_commit: 3c4cda1 |
| git_last_commit_date: 2021-10-26 12:43:41 -0400 (Tue, 26 Oct 2021) |
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | |  | |
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | |
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | |
Summary
Command output
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/TFutils_1.14.0.tar.gz && rm -rf TFutils.buildbin-libdir && mkdir TFutils.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TFutils.buildbin-libdir TFutils_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL TFutils_1.14.0.zip && rm TFutils_1.14.0.tar.gz TFutils_1.14.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
52 4313k 52 2267k 0 0 2178k 0 0:00:01 0:00:01 --:--:-- 2178k
100 4313k 100 4313k 0 0 2600k 0 0:00:01 0:00:01 --:--:-- 2599k
install for i386
Warning in untar2(tarfile, files, list, exdir, restore_times) :
failed to copy 'TFutils/vignettes/TFutils_f1000/TFutils.Rmd' to 'TFutils/vignettes/TFutils.Rmd'
Warning in untar2(tarfile, files, list, exdir, restore_times) :
failed to copy 'TFutils/vignettes/TFutils_f1000/f1000_styles.sty' to 'TFutils/vignettes/f1000_styles.sty'
Warning in untar2(tarfile, files, list, exdir, restore_times) :
failed to copy 'TFutils/vignettes/TFutils_f1000/AMIGOplus.png' to 'TFutils/vignettes/AMIGOplus.png'
Warning in untar2(tarfile, files, list, exdir, restore_times) :
failed to copy 'TFutils/vignettes/TFutils_f1000/F1000header.png' to 'TFutils/vignettes/F1000header.png'
Warning in untar2(tarfile, files, list, exdir, restore_times) :
restoring symbolic link as a file copy
* installing *source* package 'TFutils' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'TFutils'
finding HTML links ... done
HGNCmap html
TFCatalog-class html
TFCatalog html
TFtargs html
URL_s3_tf html
anchor_pmids html
browse_gotf_main html
browse_humantfs_main html
browse_lambert_gwaslinks html
browse_lambert_main html
cisbpTFcat html
cisbpTFcat_2.0 html
defaultCircosParms html
demo_fimo_granges html
directHitsInCISBP html
encode690 html
fimo16 html
fimoMap html
fimo_granges html
genemodForGviz html
genemodelDF html
get_rslocs_38 html
grabTab html
gwascat_hg19_chr17 html
hocomoco.mono html
hocomoco.mono.sep2018 html
importFIMO html
importFIMO_local_split html
lambert_snps html
metadata_tf html
named_tf html
retrieve_gotf_main html
retrieve_humantfs_main html
retrieve_lambert_main html
seqinfo_hg19_chr17 html
setupHIZE html
show-TFCatalog-method html
tffamCirc.plot html
tffamCirc.prep html
tfhash html
tftColl html
tftCollMap html
topTraitsOfTargets html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
Warning in untar2(tarfile, files, list, exdir, restore_times) :
failed to copy 'TFutils/vignettes/TFutils_f1000/TFutils.Rmd' to 'TFutils/vignettes/TFutils.Rmd'
Warning in untar2(tarfile, files, list, exdir, restore_times) :
failed to copy 'TFutils/vignettes/TFutils_f1000/f1000_styles.sty' to 'TFutils/vignettes/f1000_styles.sty'
Warning in untar2(tarfile, files, list, exdir, restore_times) :
failed to copy 'TFutils/vignettes/TFutils_f1000/AMIGOplus.png' to 'TFutils/vignettes/AMIGOplus.png'
Warning in untar2(tarfile, files, list, exdir, restore_times) :
failed to copy 'TFutils/vignettes/TFutils_f1000/F1000header.png' to 'TFutils/vignettes/F1000header.png'
Warning in untar2(tarfile, files, list, exdir, restore_times) :
restoring symbolic link as a file copy
* installing *source* package 'TFutils' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'TFutils' as TFutils_1.14.0.zip
* DONE (TFutils)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'TFutils' successfully unpacked and MD5 sums checked