| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:07:28 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the TBSignatureProfiler package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/TBSignatureProfiler.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1935/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| TBSignatureProfiler 1.6.0 (landing page) Aubrey Odom
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: TBSignatureProfiler |
| Version: 1.6.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/TBSignatureProfiler_1.6.0.tar.gz && rm -rf TBSignatureProfiler.buildbin-libdir && mkdir TBSignatureProfiler.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TBSignatureProfiler.buildbin-libdir TBSignatureProfiler_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL TBSignatureProfiler_1.6.0.zip && rm TBSignatureProfiler_1.6.0.tar.gz TBSignatureProfiler_1.6.0.zip |
| StartedAt: 2022-04-12 07:09:42 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 07:10:48 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 65.8 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/TBSignatureProfiler_1.6.0.tar.gz && rm -rf TBSignatureProfiler.buildbin-libdir && mkdir TBSignatureProfiler.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TBSignatureProfiler.buildbin-libdir TBSignatureProfiler_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL TBSignatureProfiler_1.6.0.zip && rm TBSignatureProfiler_1.6.0.tar.gz TBSignatureProfiler_1.6.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
10 2823k 10 301k 0 0 475k 0 0:00:05 --:--:-- 0:00:05 475k
54 2823k 54 1539k 0 0 941k 0 0:00:02 0:00:01 0:00:01 941k
100 2823k 100 2823k 0 0 1246k 0 0:00:02 0:00:02 --:--:-- 1246k
install for i386
* installing *source* package 'TBSignatureProfiler' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'TBSignatureProfiler'
finding HTML links ... done
Bootstrap_LOOCV_LR_AUC html
COVIDsignatures html
LOOAUC_simple_multiple_noplot_one_df html
ObtainSampleScore_OriginalModel html
OriginalTrainingData html
SignatureQuantitative html
SulimanOriginalModel html
TBSPapp html
TB_hiv html
TB_indian html
TBcommon html
TBsignatures html
TBsignaturesSplit html
addTBsignature html
bootstrapAUC html
common_sigAnnotData html
compareAlgs html
compareBoxplots html
cv_glmnet_OriginalModel html
deseq2_norm_rle html
distinctColors html
dot-OriginalModel_NoRetraining html
dot-OriginalModel_Retraining html
evaluateOriginalModel html
knn_OriginalModel html
lda_OriginalModel html
mkAssay html
plotQuantitative html
randomForest_OriginalModel html
ref_combat_impute html
runTBsigProfiler html
sigAnnotData html
signatureBoxplot html
signatureGeneHeatmap html
signatureHeatmap html
signatureROCplot html
signatureROCplot_CI html
subsetGeneSet html
svm_OriginalModel html
tableAUC html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'TBSignatureProfiler' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'TBSignatureProfiler' as TBSignatureProfiler_1.6.0.zip
* DONE (TBSignatureProfiler)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'TBSignatureProfiler' successfully unpacked and MD5 sums checked