| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:07:17 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the SCAN.UPC package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SCAN.UPC.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1703/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| SCAN.UPC 2.36.0 (landing page) Stephen R. Piccolo
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: SCAN.UPC |
| Version: 2.36.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/SCAN.UPC_2.36.0.tar.gz && rm -rf SCAN.UPC.buildbin-libdir && mkdir SCAN.UPC.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SCAN.UPC.buildbin-libdir SCAN.UPC_2.36.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL SCAN.UPC_2.36.0.zip && rm SCAN.UPC_2.36.0.tar.gz SCAN.UPC_2.36.0.zip |
| StartedAt: 2022-04-12 06:38:05 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 06:39:09 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 63.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/SCAN.UPC_2.36.0.tar.gz && rm -rf SCAN.UPC.buildbin-libdir && mkdir SCAN.UPC.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SCAN.UPC.buildbin-libdir SCAN.UPC_2.36.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL SCAN.UPC_2.36.0.zip && rm SCAN.UPC_2.36.0.tar.gz SCAN.UPC_2.36.0.zip
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install for i386
* installing *source* package 'SCAN.UPC' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Parallel computing support for 'oligo/crlmm': Disabled
- Load 'ff'
- Load and register a 'foreach' adaptor
Example - Using 'multicore' for 2 cores:
library(doMC)
registerDoMC(2)
================================================================================
** help
*** installing help indices
converting help for package 'SCAN.UPC'
finding HTML links ... done
BatchAdjust html
BatchAdjustFromFile html
InstallBrainArrayPackage html
ParseMetaFromGtfFile html
SCAN html
SCAN_TwoColor html
UPC_Generic html
UPC_Generic_ExpressionSet html
UPC_RNASeq html
UPC_RNASeq_Single html
UPC_TwoColor html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Parallel computing support for 'oligo/crlmm': Disabled
- Load 'ff'
- Load and register a 'foreach' adaptor
Example - Using 'multicore' for 2 cores:
library(doMC)
registerDoMC(2)
================================================================================
** testing if installed package can be loaded from final location
Parallel computing support for 'oligo/crlmm': Disabled
- Load 'ff'
- Load and register a 'foreach' adaptor
Example - Using 'multicore' for 2 cores:
library(doMC)
registerDoMC(2)
================================================================================
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'SCAN.UPC' ...
** testing if installed package can be loaded
Parallel computing support for 'oligo/crlmm': Disabled
- Load 'ff'
- Load and register a 'foreach' adaptor
Example - Using 'multicore' for 2 cores:
library(doMC)
registerDoMC(2)
================================================================================
* MD5 sums
packaged installation of 'SCAN.UPC' as SCAN.UPC_2.36.0.zip
* DONE (SCAN.UPC)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'SCAN.UPC' successfully unpacked and MD5 sums checked