| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:05:51 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the Rgin package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Rgin.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1591/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| Rgin 1.14.0 (landing page) Hector Climente-Gonzalez
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | ERROR | ERROR | skipped | |||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | ERROR | ERROR | skipped | skipped | |||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | ERROR | ERROR | skipped | skipped | |||||||||
| Package: Rgin |
| Version: 1.14.0 |
| Command: /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data Rgin |
| StartedAt: 2022-04-12 05:40:36 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 05:40:38 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 1.9 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data Rgin
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* checking for file ‘Rgin/DESCRIPTION’ ... OK
* preparing ‘Rgin’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
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* installing *source* package ‘Rgin’ ...
** using staged installation
** libs
gcc -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include' -I/usr/local/include -fpic -g -O2 -Wall -c Rgin-init.c -o Rgin-init.o
g++ -std=gnu++14 -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include' -I/usr/local/include -std=c++11 -fopenmp -D_USE_KNETFILE -D_FILE_OFFSET_BITS=64 -U_FORTIFY_SOURCE -DBGZF_CACHE -DAS_GINLIB -DAS_RGINLIB -I./include -I./lib `/home/biocbuild/bbs-3.14-bioc/R/bin/Rscript -e "Rcpp:::CxxFlags()"` -lz -fpic -g -O2 -Wall -c src/feature_selection/feature_selector.cc -o src/feature_selection/feature_selector.o
In file included from ./include/gin/feature_selection/scones.h:8,
from src/feature_selection/feature_selector.cc:9:
./include/gin/globals.h:60:10: fatal error: Rcpp.h: No such file or directory
60 | #include "Rcpp.h"
| ^~~~~~~~
compilation terminated.
make: *** [/home/biocbuild/bbs-3.14-bioc/R/etc/Makeconf:173: src/feature_selection/feature_selector.o] Error 1
ERROR: compilation failed for package ‘Rgin’
* removing ‘/tmp/RtmpRQtRU9/Rinst1a65bc153bf705/Rgin’
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ERROR: package installation failed