Federico Marini
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/GeneTonic |
| git_branch: RELEASE_3_14 |
| git_last_commit: c9ee95b |
| git_last_commit_date: 2022-03-24 08:30:47 -0400 (Thu, 24 Mar 2022) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:06:37 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the GeneTonic package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GeneTonic.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 739/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| GeneTonic 1.6.4 (landing page) Federico Marini
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | ERROR | OK | |||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: GeneTonic |
| Version: 1.6.4 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/GeneTonic_1.6.4.tar.gz && rm -rf GeneTonic.buildbin-libdir && mkdir GeneTonic.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneTonic.buildbin-libdir GeneTonic_1.6.4.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL GeneTonic_1.6.4.zip && rm GeneTonic_1.6.4.tar.gz GeneTonic_1.6.4.zip |
| StartedAt: 2022-04-12 06:24:48 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 06:27:13 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 144.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/GeneTonic_1.6.4.tar.gz && rm -rf GeneTonic.buildbin-libdir && mkdir GeneTonic.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneTonic.buildbin-libdir GeneTonic_1.6.4.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL GeneTonic_1.6.4.zip && rm GeneTonic_1.6.4.tar.gz GeneTonic_1.6.4.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
25 1835k 25 461k 0 0 728k 0 0:00:02 --:--:-- 0:00:02 728k
100 1835k 100 1835k 0 0 1205k 0 0:00:01 0:00:01 --:--:-- 1206k
install for i386
* installing *source* package 'GeneTonic' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'GeneTonic'
finding HTML links ... done
GeneTonic-pkg html
GeneTonic html
GeneTonic_list html
check_colors html
checkup_GeneTonic html
checkup_gtl html
cluster_markov html
create_jaccard_matrix html
create_kappa_matrix html
describe_gtl html
deseqresult2df html
distill_enrichment html
dot-check_pandoc html
enhance_table html
enrichment_map html
enrichr_output_macrophage html
export_for_iSEE html
finding level-2 HTML links ... done
export_to_sif html
fgseaRes html
gene_plot html
geneinfo_2_html html
get_aggrscores html
get_expression_values html
ggs_backbone html
ggs_graph html
go_2_html html
gostres_macrophage html
gs_alluvial html
gs_dendro html
gs_fuzzyclustering html
gs_heatmap html
gs_horizon html
gs_mds html
gs_radar html
gs_scores html
gs_scoresheat html
gs_simplify html
gs_summary_heat html
gs_summary_overview html
gs_summary_overview_pair html
gs_volcano html
happy_hour html
map2color html
overlap_coefficient html
overlap_jaccard_index html
res_macrophage_IFNg_vs_naive html
shake_davidResult html
shake_enrichResult html
shake_enrichrResult html
shake_fgseaResult html
shake_gprofilerResult html
shake_gsenrichResult html
shake_topGOtableResult html
signature_volcano html
styleColorBar_divergent html
summarize_ggs_hubgenes html
topgoDE_macrophage_IFNg_vs_naive html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'GeneTonic' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GeneTonic' as GeneTonic_1.6.4.zip
* DONE (GeneTonic)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'GeneTonic' successfully unpacked and MD5 sums checked