Nicolò Rossi
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/CIMICE |
| git_branch: RELEASE_3_14 |
| git_last_commit: 46eaa9d |
| git_last_commit_date: 2022-03-12 10:03:45 -0400 (Sat, 12 Mar 2022) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:06:20 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the CIMICE package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CIMICE.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 319/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| CIMICE 1.2.1 (landing page) Nicolò Rossi
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: CIMICE |
| Version: 1.2.1 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/CIMICE_1.2.1.tar.gz && rm -rf CIMICE.buildbin-libdir && mkdir CIMICE.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CIMICE.buildbin-libdir CIMICE_1.2.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL CIMICE_1.2.1.zip && rm CIMICE_1.2.1.tar.gz CIMICE_1.2.1.zip |
| StartedAt: 2022-04-12 06:04:48 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 06:07:29 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 160.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/CIMICE_1.2.1.tar.gz && rm -rf CIMICE.buildbin-libdir && mkdir CIMICE.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CIMICE.buildbin-libdir CIMICE_1.2.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL CIMICE_1.2.1.zip && rm CIMICE_1.2.1.tar.gz CIMICE_1.2.1.zip
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install for i386
* installing *source* package 'CIMICE' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'CIMICE'
finding HTML links ... done
CIMICE html
annotate_mutational_matrix html
binary_radix_sort html
build_subset_graph html
build_topology_subset html
chunk_reader html
compact_dataset html
computeDWNW html
computeDWNW_aux html
computeUPW html
computeUPW_aux html
compute_weights_default html
corrplot_from_mutational_matrix html
corrplot_genes html
corrplot_samples html
dataset_preprocessing html
dataset_preprocessing_population html
draw_ggraph html
draw_networkD3 html
draw_visNetwork html
example_dataset html
example_dataset_withFreqs html
finalize_generator html
fix_clonal_genotype html
format_labels html
gene_mutations_hist html
get_no_of_children html
graph_non_transitive_subset_topology html
make_dataset html
make_generator_stub html
make_labels html
normalizeDWNW html
normalizeUPW html
perturb_dataset html
plot_generator html
prepare_generator_edge_set_command html
prepare_labels html
quick_run html
read html
read_CAPRI html
read_CAPRI_string html
read_CAPRIpop html
read_CAPRIpop_string html
read_MAF html
read_matrix html
remove_transitive_edges html
sample_mutations_hist html
select_genes_on_mutations html
select_samples_on_mutations html
set_generator_edges html
simulate_generator html
to_dot html
update_df html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'CIMICE' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CIMICE' as CIMICE_1.2.1.zip
* DONE (CIMICE)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'CIMICE' successfully unpacked and MD5 sums checked