Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:06:20 -0400 (Wed, 13 Apr 2022).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the CIMICE package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CIMICE.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 319/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
CIMICE 1.2.1 (landing page) Nicolò Rossi
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: CIMICE |
Version: 1.2.1 |
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/CIMICE_1.2.1.tar.gz && rm -rf CIMICE.buildbin-libdir && mkdir CIMICE.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CIMICE.buildbin-libdir CIMICE_1.2.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL CIMICE_1.2.1.zip && rm CIMICE_1.2.1.tar.gz CIMICE_1.2.1.zip |
StartedAt: 2022-04-12 06:04:48 -0400 (Tue, 12 Apr 2022) |
EndedAt: 2022-04-12 06:07:29 -0400 (Tue, 12 Apr 2022) |
EllapsedTime: 160.6 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/CIMICE_1.2.1.tar.gz && rm -rf CIMICE.buildbin-libdir && mkdir CIMICE.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CIMICE.buildbin-libdir CIMICE_1.2.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL CIMICE_1.2.1.zip && rm CIMICE_1.2.1.tar.gz CIMICE_1.2.1.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 500k 100 500k 0 0 888k 0 --:--:-- --:--:-- --:--:-- 890k install for i386 * installing *source* package 'CIMICE' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'CIMICE' finding HTML links ... done CIMICE html annotate_mutational_matrix html binary_radix_sort html build_subset_graph html build_topology_subset html chunk_reader html compact_dataset html computeDWNW html computeDWNW_aux html computeUPW html computeUPW_aux html compute_weights_default html corrplot_from_mutational_matrix html corrplot_genes html corrplot_samples html dataset_preprocessing html dataset_preprocessing_population html draw_ggraph html draw_networkD3 html draw_visNetwork html example_dataset html example_dataset_withFreqs html finalize_generator html fix_clonal_genotype html format_labels html gene_mutations_hist html get_no_of_children html graph_non_transitive_subset_topology html make_dataset html make_generator_stub html make_labels html normalizeDWNW html normalizeUPW html perturb_dataset html plot_generator html prepare_generator_edge_set_command html prepare_labels html quick_run html read html read_CAPRI html read_CAPRI_string html read_CAPRIpop html read_CAPRIpop_string html read_MAF html read_matrix html remove_transitive_edges html sample_mutations_hist html select_genes_on_mutations html select_samples_on_mutations html set_generator_edges html simulate_generator html to_dot html update_df html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'CIMICE' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'CIMICE' as CIMICE_1.2.1.zip * DONE (CIMICE) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'CIMICE' successfully unpacked and MD5 sums checked