Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:58:41 -0400 (Sat, 17 Oct 2020).
TO THE DEVELOPERS/MAINTAINERS OF THE HilbertCurve PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 819/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
HilbertCurve 1.18.0 Zuguang Gu
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | [ OK ] | OK |
Package: HilbertCurve |
Version: 1.18.0 |
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --install=check:HilbertCurve.install-out.txt --library=/Library/Frameworks/R.framework/Versions/Current/Resources/library --no-vignettes --timings HilbertCurve_1.18.0.tar.gz |
StartedAt: 2020-10-17 02:01:15 -0400 (Sat, 17 Oct 2020) |
EndedAt: 2020-10-17 02:04:39 -0400 (Sat, 17 Oct 2020) |
EllapsedTime: 204.5 seconds |
RetCode: 0 |
Status: OK |
CheckDir: HilbertCurve.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --install=check:HilbertCurve.install-out.txt --library=/Library/Frameworks/R.framework/Versions/Current/Resources/library --no-vignettes --timings HilbertCurve_1.18.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/Users/biocbuild/bbs-3.11-bioc/meat/HilbertCurve.Rcheck’ * using R version 4.0.3 (2020-10-10) * using platform: x86_64-apple-darwin17.0 (64-bit) * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘HilbertCurve/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘HilbertCurve’ version ‘1.18.0’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘HilbertCurve’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed hc_layer-HilbertCurve-method 19.258 0.377 19.655 hc_layer-GenomicHilbertCurve-method 14.835 0.249 15.099 GenomicHilbertCurve 12.149 0.155 12.927 hc_map-GenomicHilbertCurve-method 6.310 0.077 6.401 hc_png-HilbertCurve-method 5.878 0.079 5.965 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘test-all.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: OK
HilbertCurve.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL HilbertCurve ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.0/Resources/library’ * installing *source* package ‘HilbertCurve’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ‘HilbertCurve.Rmd’ ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HilbertCurve)
HilbertCurve.Rcheck/tests/test-all.Rout
R version 4.0.3 (2020-10-10) -- "Bunny-Wunnies Freak Out" Copyright (C) 2020 The R Foundation for Statistical Computing Platform: x86_64-apple-darwin17.0 (64-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(testthat) > suppressWarnings(suppressPackageStartupMessages(library(HilbertCurve))) > > test_check("HilbertCurve") ══ testthat results ═══════════════════════════════════════════════════════════ [ OK: 8 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 0 ] > > proc.time() user system elapsed 6.736 0.355 7.069
HilbertCurve.Rcheck/HilbertCurve-Ex.timings
name | user | system | elapsed | |
GenomicHilbertCurve-class | 0 | 0 | 0 | |
GenomicHilbertCurve | 12.149 | 0.155 | 12.927 | |
HilbertCurve-class | 0.000 | 0.000 | 0.001 | |
HilbertCurve | 0.702 | 0.025 | 0.730 | |
default_overlay | 0.001 | 0.001 | 0.001 | |
hc_centered_text-HilbertCurve-method | 0.206 | 0.001 | 0.207 | |
hc_layer-GenomicHilbertCurve-method | 14.835 | 0.249 | 15.099 | |
hc_layer-HilbertCurve-method | 19.258 | 0.377 | 19.655 | |
hc_layer-dispatch | 0.000 | 0.001 | 0.000 | |
hc_level-HilbertCurve-method | 0.040 | 0.004 | 0.044 | |
hc_map-GenomicHilbertCurve-method | 6.310 | 0.077 | 6.401 | |
hc_normal_points-HilbertCurve-method | 0 | 0 | 0 | |
hc_offset-HilbertCurve-method | 0.009 | 0.002 | 0.012 | |
hc_png-HilbertCurve-method | 5.878 | 0.079 | 5.965 | |
hc_points-GenomicHilbertCurve-method | 0.632 | 0.022 | 0.655 | |
hc_points-HilbertCurve-method | 0.991 | 0.018 | 1.012 | |
hc_points-dispatch | 0 | 0 | 0 | |
hc_polygon-GenomicHilbertCurve-method | 0.826 | 0.011 | 0.837 | |
hc_polygon-HilbertCurve-method | 0.177 | 0.009 | 0.185 | |
hc_polygon-dispatch | 0.001 | 0.000 | 0.001 | |
hc_rect-GenomicHilbertCurve-method | 0.525 | 0.011 | 0.537 | |
hc_rect-HilbertCurve-method | 0.111 | 0.006 | 0.116 | |
hc_rect-dispatch | 0.001 | 0.001 | 0.001 | |
hc_segmented_points-HilbertCurve-method | 0.001 | 0.000 | 0.001 | |
hc_segments-GenomicHilbertCurve-method | 0.908 | 0.018 | 1.014 | |
hc_segments-HilbertCurve-method | 0.170 | 0.008 | 0.177 | |
hc_segments-dispatch | 0 | 0 | 0 | |
hc_text-GenomicHilbertCurve-method | 0.411 | 0.009 | 0.420 | |
hc_text-HilbertCurve-method | 0.103 | 0.006 | 0.109 | |
hc_text-dispatch | 0.000 | 0.000 | 0.001 | |
is_white | 0.000 | 0.001 | 0.001 | |
show-HilbertCurve-method | 0.011 | 0.003 | 0.014 | |
unzoom-HilbertCurve-method | 0.007 | 0.001 | 0.008 | |
zoom-HilbertCurve-method | 0.007 | 0.001 | 0.006 | |