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INSTALL report for ExpressionView on malbec2

This page was generated on 2020-10-17 11:54:44 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE ExpressionView PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 578/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ExpressionView 1.40.0
Gabor Csardi
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/ExpressionView
Branch: RELEASE_3_11
Last Commit: dc53be3
Last Changed Date: 2020-04-27 14:21:46 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64 [ OK ] OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: ExpressionView
Version: 1.40.0
Command: /home/biocbuild/bbs-3.11-bioc/R/bin/R CMD INSTALL ExpressionView
StartedAt: 2020-10-16 16:36:49 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 16:37:13 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 24.1 seconds
RetCode: 0
Status:  OK 

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.11-bioc/R/bin/R CMD INSTALL ExpressionView
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* installing to library ‘/home/biocbuild/bbs-3.11-bioc/R/library’
* installing *source* package ‘ExpressionView’ ...
** using staged installation
** libs
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c order.cpp -o order.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c orderclusters.cpp -o orderclusters.o
g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.11-bioc/R/lib -L/usr/local/lib -o ExpressionView.so order.o orderclusters.o -L/home/biocbuild/bbs-3.11-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.11-bioc/R/library/00LOCK-ExpressionView/00new/ExpressionView/libs
** R
** inst
** byte-compile and prepare package for lazy loading
Warning message:
Package 'KEGG.db' is deprecated and will be removed from Bioconductor
  version 3.12 
in method for ‘ExportEV’ with signature ‘biclusters="Biclust"’: no definition for class “Biclust”
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'KEGG.db' is deprecated and will be removed from Bioconductor
  version 3.12
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
Warning: Package 'KEGG.db' is deprecated and will be removed from Bioconductor
  version 3.12
** testing if installed package keeps a record of temporary installation path
* DONE (ExpressionView)