Jianhong Ou
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/ATACseqQC |
| Branch: RELEASE_3_11 |
| Last Commit: b43a14c |
| Last Changed Date: 2020-09-01 10:32:46 -0400 (Tue, 01 Sep 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:56:06 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE ATACseqQC PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 96/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| ATACseqQC 1.12.5 Jianhong Ou
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: ATACseqQC |
| Version: 1.12.5 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/ATACseqQC_1.12.5.tar.gz && rm -rf ATACseqQC.buildbin-libdir && mkdir ATACseqQC.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ATACseqQC.buildbin-libdir ATACseqQC_1.12.5.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL ATACseqQC_1.12.5.zip && rm ATACseqQC_1.12.5.tar.gz ATACseqQC_1.12.5.zip |
| StartedAt: 2020-10-16 19:23:10 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 19:25:42 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 151.8 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/ATACseqQC_1.12.5.tar.gz && rm -rf ATACseqQC.buildbin-libdir && mkdir ATACseqQC.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ATACseqQC.buildbin-libdir ATACseqQC_1.12.5.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL ATACseqQC_1.12.5.zip && rm ATACseqQC_1.12.5.tar.gz ATACseqQC_1.12.5.zip
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install for i386
* installing *source* package 'ATACseqQC' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'ATACseqQC'
finding HTML links ... done
ATACseqQC-package html
DB html
NFRscore html
PTscore html
TSSEscore html
bamQC html
distanceDyad html
enrichedFragments html
estimateLibComplexity html
factorFootprints html
footprintsScanner html
fragSizeDist html
peakdet html
plotCorrelation html
plotFootprints html
pwmscores html
readBamFile html
finding level-2 HTML links ... done
readsDupFreq html
saturationPlot html
shiftGAlignments html
shiftGAlignmentsList html
shiftReads html
splitBam html
splitGAlignmentsByCut html
vPlot html
writeListOfGAlignments html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'ATACseqQC' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ATACseqQC' as ATACseqQC_1.12.5.zip
* DONE (ATACseqQC)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'ATACseqQC' successfully unpacked and MD5 sums checked