Back to Multiple platform build/check report for BioC 3.11 |
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This page was generated on 2020-10-17 11:56:52 -0400 (Sat, 17 Oct 2020).
TO THE DEVELOPERS/MAINTAINERS OF THE infercnv PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 876/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
infercnv 1.4.0 Christophe Georgescu
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | |||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK |
Package: infercnv |
Version: 1.4.0 |
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/infercnv_1.4.0.tar.gz && rm -rf infercnv.buildbin-libdir && mkdir infercnv.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=infercnv.buildbin-libdir infercnv_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL infercnv_1.4.0.zip && rm infercnv_1.4.0.tar.gz infercnv_1.4.0.zip |
StartedAt: 2020-10-16 17:57:27 -0400 (Fri, 16 Oct 2020) |
EndedAt: 2020-10-16 17:59:45 -0400 (Fri, 16 Oct 2020) |
EllapsedTime: 138.3 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/infercnv_1.4.0.tar.gz && rm -rf infercnv.buildbin-libdir && mkdir infercnv.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=infercnv.buildbin-libdir infercnv_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL infercnv_1.4.0.zip && rm infercnv_1.4.0.tar.gz infercnv_1.4.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 56 3762k 56 2112k 0 0 11.8M 0 --:--:-- --:--:-- --:--:-- 12.2M 100 3762k 100 3762k 0 0 19.4M 0 --:--:-- --:--:-- --:--:-- 20.0M install for i386 * installing *source* package 'infercnv' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'infercnv' finding HTML links ... done CreateInfercnvObject html HMM_states html MCMC_inferCNV-class html add_to_seurat html annots html apply_median_filtering html color.palette html data html filterHighPNormals html genes html inferCNVBayesNet html infercnv-class html infercnv-package html infercnv_obj html mcmc_obj html plot_cnv html plot_per_group html run html sample_object html validate_infercnv_obj html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'infercnv' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'infercnv' as infercnv_1.4.0.zip * DONE (infercnv) * installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library' package 'infercnv' successfully unpacked and MD5 sums checked