pasilla 0.8.0
Alejandro Reyes
| Snapshot Date: 2015-10-07 07:15:35 -0700 (Wed, 07 Oct 2015) | | URL: https://hedgehog.fhcrc.org/bioc-data/branches/RELEASE_3_1/experiment/pkgs/pasilla | | Last Changed Rev: 3279 / Revision: 3442 | | Last Changed Date: 2015-04-16 13:16:53 -0700 (Thu, 16 Apr 2015) |
| zin2 | Linux (Ubuntu 14.04.2 LTS) / x86_64 | OK | OK | WARNINGS | |  |
| moscato2 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | OK | OK | [ WARNINGS ] | OK | |
| petty | Mac OS X Snow Leopard (10.6.8) / x86_64 | OK | OK | WARNINGS | OK | |
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### Running command:
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### rm -rf pasilla.buildbin-libdir pasilla.Rcheck && mkdir pasilla.buildbin-libdir pasilla.Rcheck && E:\biocbld\bbs-3.1-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=pasilla.buildbin-libdir pasilla_0.8.0.tar.gz >pasilla.Rcheck\00install.out 2>&1 && cp pasilla.Rcheck\00install.out pasilla-install.out && E:\biocbld\bbs-3.1-bioc\R\bin\R.exe CMD check --library=pasilla.buildbin-libdir --install="check:pasilla-install.out" --force-multiarch --no-vignettes --timings pasilla_0.8.0.tar.gz
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* using log directory 'E:/biocbld/bbs-3.1-data-experiment/meat/pasilla.Rcheck'
* using R version 3.2.2 (2015-08-14)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'pasilla/DESCRIPTION' ... OK
* this is package 'pasilla' version '0.8.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'pasilla' can be installed ... OK
* checking installed package size ... NOTE
installed size is 23.5Mb
sub-directories of 1Mb or more:
extdata 22.6Mb
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... WARNING
Creating a generic function for 'nchar' from package 'base' in package 'S4Vectors'
Note: significantly better compression could be obtained
by using R CMD build --resave-data
old_size new_size compress
pasillaDEXSeqDataSet.RData 37Kb 24Kb xz
pasillaExons.RData 59Kb 22Kb xz
pasillaGenes.RData 502Kb 104Kb xz
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... NONE
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 WARNING, 2 NOTEs
See
'E:/biocbld/bbs-3.1-data-experiment/meat/pasilla.Rcheck/00check.log'
for details.
install for i386
* installing *source* package 'pasilla' ...
** data
** inst
** help
*** installing help indices
** building package indices
Creating a generic function for 'nchar' from package 'base' in package 'S4Vectors'
** installing vignettes
** testing if installed package can be loaded
install for x64
* installing *source* package 'pasilla' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'pasilla' as pasilla_0.8.0.zip
* DONE (pasilla)