ListerEtAlBSseq 1.0.1
Kamal Kishore
| Snapshot Date: 2015-04-08 06:15:26 -0700 (Wed, 08 Apr 2015) | | URL: https://hedgehog.fhcrc.org/bioc-data/branches/RELEASE_3_0/experiment/pkgs/ListerEtAlBSseq | | Last Changed Rev: 3237 / Revision: 3266 | | Last Changed Date: 2015-03-30 02:12:11 -0700 (Mon, 30 Mar 2015) |
| zin1 | Linux (Ubuntu 12.04.4 LTS) / x86_64 | NotNeeded | OK | WARNINGS | |
| moscato1 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | NotNeeded | OK | [ WARNINGS ] | OK |
| perceval | Mac OS X Snow Leopard (10.6.8) / x86_64 | NotNeeded | OK | WARNINGS | OK |
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### Running command:
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### rm -rf ListerEtAlBSseq.buildbin-libdir ListerEtAlBSseq.Rcheck && mkdir ListerEtAlBSseq.buildbin-libdir ListerEtAlBSseq.Rcheck && D:\biocbld\bbs-3.0-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=ListerEtAlBSseq.buildbin-libdir ListerEtAlBSseq_1.0.1.tar.gz >ListerEtAlBSseq.Rcheck\00install.out 2>&1 && cp ListerEtAlBSseq.Rcheck\00install.out ListerEtAlBSseq-install.out && D:\biocbld\bbs-3.0-bioc\R\bin\R.exe CMD check --library=ListerEtAlBSseq.buildbin-libdir --install="check:ListerEtAlBSseq-install.out" --force-multiarch --no-vignettes --timings ListerEtAlBSseq_1.0.1.tar.gz
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* using log directory 'D:/biocbld/bbs-3.0-data-experiment/meat/ListerEtAlBSseq.Rcheck'
* using R version 3.1.3 (2015-03-09)
* using platform: i386-w64-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'ListerEtAlBSseq/DESCRIPTION' ... OK
* this is package 'ListerEtAlBSseq' version '1.0.1'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'ListerEtAlBSseq' can be installed ... OK
* checking installed package size ... NOTE
installed size is 659.0Mb
sub-directories of 1Mb or more:
data 2.9Mb
extdata 656.0Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Non-standard license specification:
Artistic 2.0
Standardizable: TRUE
Standardized license specification:
Artistic-2.0
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... WARNING
'library' or 'require' call not declared from: 'BSgenome.Hsapiens.UCSC.hg18'
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... [20s] OK
** running examples for arch 'x64' ... [20s] OK
* checking PDF version of manual ... OK
* DONE
WARNING: There was 1 warning.
NOTE: There were 2 notes.
See
'D:/biocbld/bbs-3.0-data-experiment/meat/ListerEtAlBSseq.Rcheck/00check.log'
for details.
install for i386
* installing *source* package 'ListerEtAlBSseq' ...
** data
** inst
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
install for x64
* installing *source* package 'ListerEtAlBSseq' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ListerEtAlBSseq' as ListerEtAlBSseq_1.0.1.zip
* DONE (ListerEtAlBSseq)