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BeadArrayUseCases 1.0.7
Mike Smith
Snapshot Date: 2012-03-23 11:15:09 -0700 (Fri, 23 Mar 2012)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/BeadArrayUseCases
Last Changed Rev: 2013 / Revision: 2028
Last Changed Date: 2012-03-17 05:16:31 -0700 (Sat, 17 Mar 2012)
wilson2 Linux (openSUSE 11.4) / x86_64  ERROR  skipped 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  ERROR  skipped  skipped 
pitt Mac OS X Leopard (10.5.8) / i386 [ ERROR ] skipped  skipped 

Summary

Package: BeadArrayUseCases
Version: 1.0.7
Command: /Library/Frameworks/R.framework/Versions/2.14/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data BeadArrayUseCases
StartedAt: 2012-03-23 13:18:09 -0700 (Fri, 23 Mar 2012)
EndedAt: 2012-03-23 13:19:02 -0700 (Fri, 23 Mar 2012)
EllapsedTime: 53.8 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

* checking for file 'BeadArrayUseCases/DESCRIPTION' ... OK
* preparing 'BeadArrayUseCases':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* creating vignettes ... ERROR
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'browseVignettes()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation("pkgname")'.

Loading required package: ggplot2
Need help? Try the ggplot2 mailing list: http://groups.google.com/group/ggplot2.
Welcome to beadarray version 2.4.1
beadarray versions >= 2.0.0 are substantial updates from beadarray 1.16.0 and earlier. Please see package vignette for details
Setting options('download.file.method.GEOquery'='auto')
Loading required package: AnnotationDbi
Loading required package: org.Hs.eg.db
Loading required package: DBI




Error: processing vignette 'BeadArrayUseCases.rnw' failed with diagnostics:
 chunk 6 (label = Import) 
Error in analyseDirectory(dir = dir, sectionNames = sectionNames, forceIScan = forceIScan,  : 
  Cannot find a files with extension either .txt or .bab
Execution halted