Package: GeneSpring

Version: 2.24.0

Command: E:\biocbld\bbs-2.7-bioc\R\bin\R.exe CMD check --no-vignettes --timings GeneSpring_2.24.0.tar.gz

StartedAt: 2011-03-31 06:37:32 -0700 (Thu, 31 Mar 2011)

EndedAt: 2011-03-31 06:38:03 -0700 (Thu, 31 Mar 2011)

EllapsedTime: 31.3 seconds

RetCode: 0

Status:  OK

CheckDir: GeneSpring.Rcheck

Warnings: 0

* using log directory 'E:/biocbld/bbs-2.7-bioc/meat/GeneSpring.Rcheck'
* using R version 2.12.2 (2011-02-25)
* using platform: i386-pc-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'GeneSpring/DESCRIPTION' ... OK
* this is package 'GeneSpring' version '2.24.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'GeneSpring' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking whether the name space can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
prepare_Rd: GSload.exp.Rd:90-91: Dropping empty section \examples
prepare_Rd: GSload.genelist.Rd:70-71: Dropping empty section \seealso
prepare_Rd: GSload.int.Rd:78-79: Dropping empty section \examples
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... SKIPPED
* checking PDF version of manual ... OK

* installing *source* package 'GeneSpring' ...
** R
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (GeneSpring)

name	user	system	elapsed
GSint	0.01	0.00	0.02
GSint2BC	0.30	0.00	0.33
GSload.genelist	0.02	0.00	0.01
GSsave.exp	0.37	0.00	0.38