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Package 61/64HostnameOS / ArchBUILDCHECKBUILD BIN
XhybCasneuf 1.0.0
Tineke Casneuf
Snapshot Date: 2009-04-10 00:03:00 -0700 (Fri, 10 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/XhybCasneuf
Last Changed Rev: 360 / Revision: 760
Last Changed Date: 2007-07-06 08:43:53 -0700 (Fri, 06 Jul 2007)
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
pelham Mac OS X Leopard (10.5.6) / i386  OK  OK  OK 
Package: XhybCasneuf
Version: 1.0.0
Command: E:\biocbld\bbs-2.3-bioc\R\bin\R.exe CMD check --no-vignettes XhybCasneuf_1.0.0.tar.gz
StartedAt: 2009-04-10 02:46:44 -0700 (Fri, 10 Apr 2009)
EndedAt: 2009-04-10 02:47:51 -0700 (Fri, 10 Apr 2009)
EllapsedTime: 67.1 seconds
RetCode: 0
Status: OK
CheckDir: XhybCasneuf.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.3-data-experiment/meat/XhybCasneuf.Rcheck'
* using R version 2.8.1 (2008-12-22)
* using session charset: ISO8859-1
* checking for file 'XhybCasneuf/DESCRIPTION' ... OK
* this is package 'XhybCasneuf' version '1.0.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'XhybCasneuf' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating XhybCasneuf-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating XhybCasneuf-manual.tex ... OK
* checking XhybCasneuf-manual.tex using pdflatex ... OK

XhybCasneuf.Rcheck/00install.out:

installing R.css in E:/biocbld/bbs-2.3-data-experiment/meat/XhybCasneuf.Rcheck


---------- Making package XhybCasneuf ------------
  adding build stamp to DESCRIPTION
  installing R files
  installing inst files
  installing data files
  preparing package XhybCasneuf for lazy loading
Loading required package: affy
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: ath1121501cdf
Loading required package: tinesath1cdf

Attaching package: 'tinesath1cdf'


	The following object(s) are masked from package:ath1121501cdf :

	 i2xy,
	 xy2i 

Loading required package: RColorBrewer
Loading required package: grid
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'XhybCasneuf'
     Formats: text html latex example chm 
  AffysTissue                       text    html    latex   example chm
  CustomsTissue                     text    html    latex   example chm
  XhybExamples-class                text    html    latex   example chm
  ex1                               text    html    latex   example chm
  plotExample                       text    html    latex   example chm
  runSimulation                     text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\bbs-2.3-data-experiment\meat\XhybCasneuf.Rcheck\00_pkg_src\XhybCasneuf\chm\XhybCasneuf.chm


Compile time: 0 minutes, 0 seconds
7	Topics
17	Local links
0	Internet links
1	Graphic


Created e:\biocbld\bbs-2.3-data-experiment\meat\XhybCasneuf.Rcheck\00_pkg_src\XhybCasneuf\chm\XhybCasneuf.chm, 20,636 bytes
Compression decreased file by 1,069 bytes.
  adding MD5 sums

* DONE (XhybCasneuf)