simulatorAPMS 1.12.0
Tony Chiang
| Snapshot Date: 2008-10-16 00:10:09 -0700 (Thu, 16 Oct 2008) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_2/madman/Rpacks/simulatorAPMS | | Last Changed Rev: 31430 / Revision: 34573 | | Last Changed Date: 2008-04-29 16:50:18 -0700 (Tue, 29 Apr 2008) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | OK | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | OK | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | [ OK ] | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
* checking for working pdflatex ... OK
* using log directory '/loc/home/biocbuild/bbs-2.2-bioc/meat/simulatorAPMS.Rcheck'
* using R version 2.7.2 (2008-08-25)
* using session charset: ISO8859-1
* checking for file 'simulatorAPMS/DESCRIPTION' ... OK
* this is package 'simulatorAPMS' version '1.12.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'simulatorAPMS' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating simulatorAPMS-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating simulatorAPMS-manual.tex ... OK
* checking simulatorAPMS-manual.tex using pdflatex ... OK
* Installing *source* package 'simulatorAPMS' ...
** R
** data
** inst
** help
Note: removing empty section \source
Note: removing empty section \references
Note: removing empty section \source
Note: removing empty section \references
Note: removing empty section \details
Note: removing empty section \details
Note: unmatched right brace in file 'filteredProt.Rd' on or after line 14
Note: removing empty section \source
Note: removing empty section \references
Note: removing empty section \source
Note: removing empty section \references
Note: removing empty section \source
Note: removing empty section \details
Note: removing empty section \references
Note: removing empty section \source
Note: removing empty section \references
Note: removing empty section \source
Note: removing empty section \references
Note: removing empty section \source
Note: removing empty section \details
Note: removing empty section \references
Note: removing empty section \source
Note: removing empty section \references
Note: removing empty section \source
Note: removing empty section \details
Note: removing empty section \references
Note: removing empty section \source
Note: removing empty section \details
Note: removing empty section \references
Note: removing empty section \source
Note: removing empty section \details
Note: removing empty section \references
>>> Building/Updating help pages for package 'simulatorAPMS'
Formats: text html latex example
APComEX text html latex example
PPIEX text html latex example
TSNMatrix text html latex example
applyDeformationError text html latex example
applyFNErrors text html latex example
applyFPErrors text html latex example
applyStickyError text html latex example
compIndep text html latex example
filteredProt text html latex example
fullSimEX text html latex example
missedProtEX text html latex example
missedProtHMSPCI text html latex example
recordSticky text html latex example
runAPComplex text html latex example
runCompIndep text html latex example
runSimEX text html latex example
runSimulators text html latex example
simEX text html latex example
simulator text html latex example
simulatorD text html latex example
simulatorS text html latex example
vBaits text html latex example
vBaitsEX text html latex example
vDeformEX text html latex example
vDeformed text html latex example
vDeformedEX text html latex example
vStickyEX text html latex example
** building package indices ...
* DONE (simulatorAPMS)