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Package 136/260HostnameOS / ArchBUILDCHECKBUILD BIN
maDB 1.12.0
Johannes Rainer
Snapshot Date: 2008-10-16 00:10:09 -0700 (Thu, 16 Oct 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_2/madman/Rpacks/maDB
Last Changed Rev: 31430 / Revision: 34573
Last Changed Date: 2008-04-29 16:50:18 -0700 (Tue, 29 Apr 2008)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64 N O T   S U P P O R T E D
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK [ OK ]
Package: maDB
Version: 1.12.0
Command: /Users/biocbuild/BBS/utils/build-universal.sh maDB_1.12.0.tar.gz /Library/Frameworks/R.framework/Versions/2.7/Resources/bin/R maDB.buildbin-libdir
StartedAt: 2008-10-16 07:01:19 -0700 (Thu, 16 Oct 2008)
EndedAt: 2008-10-16 07:01:31 -0700 (Thu, 16 Oct 2008)
EllapsedTime: 11.5 seconds
RetCode: 0
Status: OK
PackageFile: maDB_1.12.0.tgz
PackageFileSize: 707.4 KiB

Command output

                INSTALLATION WITH 'R CMD INSTALL maDB_1.12.0.tar.gz'

* Installing to library 'maDB.buildbin-libdir'
* Installing *source* package 'maDB' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: affy
Loading required package: affyio
Loading required package: preprocessCore
Loading required package: pgUtils
Loading required package: Rdbi
Loading required package: RdbiPgSQL

Attaching package: 'RdbiPgSQL'


	The following object(s) are masked from package:Rdbi :

	 dbAppendTable 

Loading required package: limma
Creating a new generic function for "sort" in "maDB"
** help
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 >>> Building/Updating help pages for package 'maDB'
     Formats: text html latex example 
  EexprSet-class                    text    html    latex
  Layout-class                      text    html    latex
  MAtoG                             text    html    latex
  MAtoR                             text    html    latex
  MadbSet-class                     text    html    latex
  Sample-class                      text    html    latex
  SignalChannel-class               text    html    latex
  Similarity-class                  text    html    latex
  arrowProgress                     text    html    latex   example
  average                           text    html    latex
  calculateSimilarity               text    html    latex   example
  checkForAnnotation                text    html    latex
  createDirs                        text    html    latex
  createEexprSetFromLimma           text    html    latex
  createFile                        text    html    latex
  createJOINQuery                   text    html    latex   example
  createSampleFromTable             text    html    latex
  dbCalculateRegulations            text    html    latex
  dbGetComparisons                  text    html    latex
  dbGetGeneRegulationRanking        text    html    latex
  dbSearchSimilarPattern            text    html    latex
  deleteExperimentFromDB            text    html    latex
  distance.euclidian                text    html    latex
  distance.pearson                  text    html    latex
  distance.pearson.uncentered       text    html    latex
  distance.spearman                 text    html    latex
  drawMAPlot                        text    html    latex
  drawVolcanoPlot                   text    html    latex
  format.latex                      text    html    latex
  getAnnotation                     text    html    latex
  getDBAnnotation                   text    html    latex
  getExpValue                       text    html    latex
  getExperimentDBInfo               text    html    latex
  getMDB                            text    html    latex
  getPK                             text    html    latex
  getPathFromFile                   text    html    latex   example
  getSamplesFromDB                  text    html    latex
  isDecimal                         text    html    latex   example
  loadFromDB                        text    html    latex
  maDB-package                      text    html    latex
  mapply                            text    html    latex   example
  mean.center                       text    html    latex   example
  meanWithoutNA                     text    html    latex   example
  medianWithoutNA                   text    html    latex   example
  multiGrep                         text    html    latex   example
  myGrep                            text    html    latex
  newMadbSet                        text    html    latex
  openMadbVignette                  text    html    latex
  plotSimilarity                    text    html    latex
  progress                          text    html    latex   example
  publishToDB                       text    html    latex
  replaceAll                        text    html    latex   example
  replaces                          text    html    latex   example
  smallALL                          text    html    latex
  toEexprSet                        text    html    latex
  updateDBAnnotation                text    html    latex
  writeFigure                       text    html    latex
  writeLatexTable                   text    html    latex
** building package indices ...
* DONE (maDB)