AnnotationDbi 1.2.2
Biocore Team c/o BioC user list
| Snapshot Date: 2008-08-08 00:12:03 -0700 (Fri, 08 Aug 2008) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_2/madman/Rpacks/AnnotationDbi | | Last Changed Rev: 32310 / Revision: 33132 | | Last Changed Date: 2008-06-17 00:37:39 -0700 (Tue, 17 Jun 2008) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | OK | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | OK | |
| wellington | Linux (openSUSE 10.3) / i686 | [ OK ] | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
* checking for file 'AnnotationDbi/DESCRIPTION' ... OK
* preparing 'AnnotationDbi':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'AnnotationDbi' ...
** R
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: DBI
Loading required package: RSQLite
Creating a new generic function for "toString" in "AnnotationDbi"
Creating a new generic function for "rev" in "AnnotationDbi"
Creating a new generic function for "colnames" in "AnnotationDbi"
Creating a new generic function for "subset" in "AnnotationDbi"
Creating a new generic function for "head" in "AnnotationDbi"
Creating a new generic function for "tail" in "AnnotationDbi"
Creating a new generic function for "nrow" in "AnnotationDbi"
Creating a new generic function for "ncol" in "AnnotationDbi"
Creating a new generic function for "as.list" in "AnnotationDbi"
Creating a new generic function for "ls" in "AnnotationDbi"
Creating a new generic function for "mget" in "AnnotationDbi"
Creating a new generic function for "eapply" in "AnnotationDbi"
Creating a new generic function for "get" in "AnnotationDbi"
Creating a new generic function for "exists" in "AnnotationDbi"
Creating a new generic function for "sample" in "AnnotationDbi"
** help
Note: removing empty section \value
Note: removing empty section \details
Note: removing empty section \details
Note: removing empty section \value
>>> Building/Updating help pages for package 'AnnotationDbi'
Formats: text html latex example
AnnDbBimap-envirAPI text html latex example
AnnDbObj-class text html latex example
AnnDbPkg-checker text html latex example
AnnDbPkg-maker text html latex example
AnnotationDbi-internals text html latex
Bimap-direction text html latex example
Bimap-keys text html latex example
Bimap-toTable text html latex example
Bimap text html latex example
BimapFormatting text html latex example
GOTerms-class text html latex example
make_eg_to_go_map text html latex example
sqlForge-makeARABIDOPSISCHIPDB text html latex example
sqlForge-makeCHIPDB text html latex example
sqlForge-makeYEASTDB text html latex example
sqlForge-popARABIDOPSISCHIPDB text html latex example
sqlForge-popCHIPDB text html latex example
sqlForge-popDB text html latex example
sqlForge-popYEASTCHIPDB text html latex example
sqlForge-wrapDBPackages text html latex example
toSQLStringSet text html latex example
** building package indices ...
* DONE (AnnotationDbi)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
WARNING: directory 'AnnotationDbi/inst/AnnDbPkg-templates/HUMAN.DB/inst/extdata' is empty
WARNING: directory 'AnnotationDbi/inst/AnnDbPkg-templates/BASEPKG.DB/inst/extdata' is empty
WARNING: directory 'AnnotationDbi/inst/AnnDbPkg-templates/HUMANCHIP.DB/inst/extdata' is empty
WARNING: directory 'AnnotationDbi/inst/AnnDbPkg-templates/GO.DB/inst/extdata' is empty
WARNING: directory 'AnnotationDbi/inst/AnnDbPkg-templates/INPARANOIDRATNO.DB/inst/extdata' is empty
WARNING: directory 'AnnotationDbi/inst/AnnDbPkg-templates/INPARANOIDSACCE.DB/inst/extdata' is empty
WARNING: directory 'AnnotationDbi/inst/AnnDbPkg-templates/KEGG.DB/inst/extdata' is empty
WARNING: directory 'AnnotationDbi/inst/AnnDbPkg-templates/MOUSECHIP.DB/inst/extdata' is empty
WARNING: directory 'AnnotationDbi/inst/AnnDbPkg-templates/RATCHIP.DB/inst/extdata' is empty
WARNING: directory 'AnnotationDbi/inst/AnnDbPkg-templates/ARABIDOPSISCHIP.DB/inst/extdata' is empty
WARNING: directory 'AnnotationDbi/inst/AnnDbPkg-templates/FLYCHIP.DB/inst/extdata' is empty
WARNING: directory 'AnnotationDbi/inst/AnnDbPkg-templates/YEAST.DB/inst/extdata' is empty
WARNING: directory 'AnnotationDbi/inst/AnnDbPkg-templates/MOUSE.DB/inst/extdata' is empty
WARNING: directory 'AnnotationDbi/inst/AnnDbPkg-templates/FLY.DB/inst/extdata' is empty
WARNING: directory 'AnnotationDbi/inst/AnnDbPkg-templates/YEASTCHIP.DB/inst/extdata' is empty
WARNING: directory 'AnnotationDbi/inst/AnnDbPkg-templates/INPARANOIDMUSMU.DB/inst/extdata' is empty
WARNING: directory 'AnnotationDbi/inst/AnnDbPkg-templates/RAT.DB/inst/extdata' is empty
WARNING: directory 'AnnotationDbi/inst/AnnDbPkg-templates/PFAM.DB/inst/extdata' is empty
WARNING: directory 'AnnotationDbi/inst/AnnDbPkg-templates/INPARANOIDHOMSA.DB/inst/extdata' is empty
WARNING: directory 'AnnotationDbi/inst/AnnDbPkg-templates/MALARIA.DB/inst/extdata' is empty
WARNING: directory 'AnnotationDbi/inst/AnnDbPkg-templates/AFFYHUEX.DB/inst/extdata' is empty
WARNING: directory 'AnnotationDbi/inst/AnnDbPkg-templates/INPARANOIDDROME.DB/inst/extdata' is empty
* building 'AnnotationDbi_1.2.2.tar.gz'