arrayQualityMetrics 1.4.18
Audrey Kauffmann
| Snapshot Date: 2008-04-09 00:13:10 -0700 (Wed, 09 Apr 2008) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/arrayQualityMetrics | | Last Changed Rev: 30842 / Revision: 30951 | | Last Changed Date: 2008-04-04 08:35:54 -0700 (Fri, 04 Apr 2008) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | OK | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | OK | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | [ OK ] | OK |
| pelham | Mac OS X Leopard (10.5.1) / i386 | OK | OK | OK |
* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.2-bioc/meat/arrayQualityMetrics.Rcheck'
* using R version 2.7.0 Under development (unstable) (2008-03-10 r44730)
* using session charset: ISO8859-1
* checking for file 'arrayQualityMetrics/DESCRIPTION' ... OK
* this is package 'arrayQualityMetrics' version '1.4.18'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'arrayQualityMetrics' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating arrayQualityMetrics-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating arrayQualityMetrics-manual.tex ... OK
* checking arrayQualityMetrics-manual.tex using pdflatex ... OK
installing R.css in E:/biocbld/bbs-2.2-bioc/meat/arrayQualityMetrics.Rcheck
---------- Making package arrayQualityMetrics ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
installing R files
installing inst files
preparing package arrayQualityMetrics for lazy loading
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: geneplotter
Loading required package: annotate
Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: RSQLite
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Loading required package: lattice
KernSmooth 2.22 installed
Copyright M. P. Wand 1997
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Loading required package: limma
Loading required package: RColorBrewer
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Loading required package: gcrma
Loading required package: matchprobes
Loading required package: simpleaffy
Loading required package: latticeExtra
Loading required package: grid
Loading required package: beadarray
Attaching package: 'beadarray'
The following object(s) are masked from package:limma :
backgroundCorrect,
imageplot,
plotMA
installing man source files
installing indices
installing help
>>> Building/Updating help pages for package 'arrayQualityMetrics'
Formats: text html latex example chm
XYfromGAL text html latex chm
arrayQualityMetrics text html latex example chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.2-bioc\meat\arrayQualityMetrics.Rcheck\00_pkg_src\arrayQualityMetrics\chm\arrayQualityMetrics.chm
Compile time: 0 minutes, 0 seconds
3 Topics
10 Local links
0 Internet links
1 Graphic
Created e:\biocbld\bbs-2.2-bioc\meat\arrayQualityMetrics.Rcheck\00_pkg_src\arrayQualityMetrics\chm\arrayQualityMetrics.chm, 19,002 bytes
Compression increased file by 3,635 bytes.
adding MD5 sums
* DONE (arrayQualityMetrics)