CALIB 1.5.0
Hui Zhao
| Snapshot Date: 2008-04-09 00:13:10 -0700 (Wed, 09 Apr 2008) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/CALIB | | Last Changed Rev: 27716 / Revision: 30951 | | Last Changed Date: 2007-10-02 18:16:39 -0700 (Tue, 02 Oct 2007) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | OK | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | [ OK ] | OK | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.1) / i386 | OK | OK | OK |
* checking for file 'CALIB/DESCRIPTION' ... OK
* preparing 'CALIB':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* Installing *source* package 'CALIB' ...
** libs
g++ -I/home/biocbuild/bbs-2.2-bioc/R/include -I/home/biocbuild/bbs-2.2-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c Design.cpp -o Design.o
g++ -I/home/biocbuild/bbs-2.2-bioc/R/include -I/home/biocbuild/bbs-2.2-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c Estimation.cpp -o Estimation.o
Estimation.cpp: In function 'SEXPREC* estimation(SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*)':
Estimation.cpp:144: warning: deprecated conversion from string constant to 'char*'
Estimation.cpp:144: warning: deprecated conversion from string constant to 'char*'
Estimation.cpp:144: warning: deprecated conversion from string constant to 'char*'
Estimation.cpp:144: warning: deprecated conversion from string constant to 'char*'
Estimation.cpp:144: warning: deprecated conversion from string constant to 'char*'
Estimation.cpp:144: warning: deprecated conversion from string constant to 'char*'
Estimation.cpp:144: warning: deprecated conversion from string constant to 'char*'
Estimation.cpp:144: warning: deprecated conversion from string constant to 'char*'
g++ -I/home/biocbuild/bbs-2.2-bioc/R/include -I/home/biocbuild/bbs-2.2-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c NormalizedData.cpp -o NormalizedData.o
g++ -I/home/biocbuild/bbs-2.2-bioc/R/include -I/home/biocbuild/bbs-2.2-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c ParameterofOneArray.cpp -o ParameterofOneArray.o
g++ -I/home/biocbuild/bbs-2.2-bioc/R/include -I/home/biocbuild/bbs-2.2-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c RawDataofOneArray.cpp -o RawDataofOneArray.o
g++ -I/home/biocbuild/bbs-2.2-bioc/R/include -I/home/biocbuild/bbs-2.2-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c SpikeofOneArray.cpp -o SpikeofOneArray.o
g++ -shared -L/usr/local/lib64 -o CALIB.so Design.o Estimation.o NormalizedData.o ParameterofOneArray.o RawDataofOneArray.o SpikeofOneArray.o -L/home/biocbuild/bbs-2.2-bioc/R/lib -lR
** R
** data
** inst
** preparing package for lazy loading
Loading required package: limma
** help
>>> Building/Updating help pages for package 'CALIB'
Formats: text html latex example
ParameterList-class text html latex
RG text html latex example
RGList_CALIB-class text html latex
SpikeList-class text html latex
adjustP2 text html latex example
calibReadMe text html latex example
cbind text html latex example
dim text html latex example
dimnames text html latex example
estimateParameter text html latex example
getColClasses text html latex example
merge text html latex example
normalizeData text html latex example
normdata text html latex example
parameter text html latex example
plotNormalizedData text html latex example
plotSpikeCI text html latex example
plotSpikeHI text html latex example
plotSpikeRG text html latex example
plotSpikeSpotError text html latex example
read.rg text html latex example
read.spike text html latex
spike text html latex example
subsetting text html latex example
** building package indices ...
* DONE (CALIB)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'CALIB_1.5.0.tar.gz'