Package: maanova

Version: 1.6.0

Command: /loc/biocbuild/bbs-2.0-bioc/R/bin/R CMD build maanova

RetCode: 0

Time: 24.5 seconds

Status: OK

PackageFile: maanova_1.6.0.tar.gz

* checking for file 'maanova/DESCRIPTION' ... OK
* preparing 'maanova':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* Installing *source* package 'maanova' ...
** libs
** arch - 
gcc -std=gnu99 -I/loc/biocbuild/bbs-2.0-bioc/R/include -I/loc/biocbuild/bbs-2.0-bioc/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c masvd.c -o masvd.o
masvd.c:114:9: warning: "/*" within comment
masvd.c:154:1: warning: "/*" within comment
masvd.c:161:5: warning: "/*" within comment
masvd.c:165:9: warning: "/*" within comment
masvd.c:189:9: warning: "/*" within comment
gcc -std=gnu99 -I/loc/biocbuild/bbs-2.0-bioc/R/include -I/loc/biocbuild/bbs-2.0-bioc/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c makeratio.c -o makeratio.o
gcc -std=gnu99 -I/loc/biocbuild/bbs-2.0-bioc/R/include -I/loc/biocbuild/bbs-2.0-bioc/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c util.c -o util.o
gcc -std=gnu99 -I/loc/biocbuild/bbs-2.0-bioc/R/include -I/loc/biocbuild/bbs-2.0-bioc/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c shift.c -o shift.o
shift.c: In function `shift':
shift.c:27: warning: unused variable `k'
gcc -std=gnu99 -shared -L/usr/local/lib -o maanova.so masvd.o makeratio.o util.o shift.o  -L/loc/biocbuild/bbs-2.0-bioc/R/lib -lRlapack   -L/loc/biocbuild/bbs-2.0-bioc/R/lib -lR
** R
** data
** demo
** inst
** preparing package for lazy loading
** help
 >>> Building/Updating help pages for package 'maanova'
     Formats: text html latex example 
  Rmaanova.version                  text    html    latex   example
  abf1                              text    html    latex   example
  adjPval                           text    html    latex   example
  arrayview                         text    html    latex   example
  consensus                         text    html    latex   example
  createData                        text    html    latex   example
  dyeswapfilter                     text    html    latex   example
  exprSet2Rawdata                   text    html    latex
  fill.missing                      text    html    latex   example
  fitmaanova                        text    html    latex   example
  fom                               text    html    latex   example
  geneprofile                       text    html    latex   example
  gridcheck                         text    html    latex   example
  kidney                            text    html    latex   example
  maanova-internal                  text    html    latex   example
  macluster                         text    html    latex   example
  makeModel                         text    html    latex   example
  matest                            text    html    latex   example
  paigen                            text    html    latex   example
  read.madata                       text    html    latex   example
  resiplot                          text    html    latex   example
  riplot                            text    html    latex   example
  subset.madata                     text    html    latex   example
  transform.madata                  text    html    latex   example
  varplot                           text    html    latex   example
  volcano                           text    html    latex   example
  write.madata                      text    html    latex   example
** building package indices ...
* DONE (maanova)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source files
    file 'maanova/src/util.h' had CRLF line endings
* checking for empty or unneeded directories
* building 'maanova_1.6.0.tar.gz'