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| Package 29/214 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
Biobase1.14.0Biocore TeamLast Changed Date: 2007-04-24 11:21:48 -0700 Last Changed Rev: 24214 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | OK | |
| wellington | Linux (SUSE 9.2) | i686 | OK | OK | ||
| churchill | Solaris 2.9 | sparc | OK | OK | ||
| lemming | Windows Server 2003 (32-bit) | x64 | OK | [ OK ] | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) | x64 | OK | OK | OK | |
| derby | Mac OS X (10.4.9) | i686 | OK | OK |
| Package: Biobase |
| Version: 1.14.0 |
| Command: D:\biocbld\bbs-2.0-bioc\R\bin\R.exe CMD check Biobase_1.14.0.tar.gz |
| RetCode: 0 |
| Time: 110.1 seconds |
| Status: OK |
| CheckDir: Biobase.Rcheck |
| Warnings: 0 |
* checking for working latex ... OK * using log directory 'D:/biocbld/bbs-2.0-bioc/meat/Biobase.Rcheck' * using R version 2.5.0 (2007-04-23) * checking for file 'Biobase/DESCRIPTION' ... OK * this is package 'Biobase' version '1.14.0' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'Biobase' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the name space can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking data for non-ASCII characters ... OK * checking for CRLF line endings in C/C++/Fortran sources/headers ... OK * checking for portable use of $BLAS_LIBS ... OK * creating Biobase-Ex.R ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * creating Biobase-manual.tex ... OK * checking Biobase-manual.tex ... OK
Biobase.Rcheck/00install.out:
installing R.css in D:/biocbld/bbs-2.0-bioc/meat/Biobase.Rcheck
---------- Making package Biobase ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
making DLL ...
making Rinit.d from Rinit.c
making envir.d from envir.c
making matchpt.d from matchpt.c
gcc -Id:/biocbld/bbs-2.0-bioc/R/include -Wall -O3 -std=gnu99 -c Rinit.c -o Rinit.o
gcc -Id:/biocbld/bbs-2.0-bioc/R/include -Wall -O3 -std=gnu99 -c envir.c -o envir.o
gcc -Id:/biocbld/bbs-2.0-bioc/R/include -Wall -O3 -std=gnu99 -c matchpt.c -o matchpt.o
windres -I d:/biocbld/bbs-2.0-bioc/R/include -i Biobase_res.rc -o Biobase_res.o
gcc -shared -s -o Biobase.dll Biobase.def Rinit.o envir.o matchpt.o Biobase_res.o -Ld:/biocbld/bbs-2.0-bioc/R/bin -lR
... DLL made
installing DLL
installing R files
save image
Loading required package: tools
installing inst files
installing data files
installing man source files
installing indices
Loading required package: methods
not zipping data
installing help
>>> Building/Updating help pages for package 'Biobase'
Formats: text html latex example chm
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Microsoft HTML Help Compiler 4.74.8702
Compiling d:\biocbld\bbs-2.0-bioc\meat\Biobase.Rcheck\00_pkg_src\Biobase\chm\Biobase.chm
Compile time: 0 minutes, 0 seconds
82 Topics
788 Local links
5 Internet links
1 Graphic
Created d:\biocbld\bbs-2.0-bioc\meat\Biobase.Rcheck\00_pkg_src\Biobase\chm\Biobase.chm, 129,970 bytes
Compression decreased file by 284,672 bytes.
adding MD5 sums
* DONE (Biobase)