RBGL

This package is for version 3.10 of Bioconductor; for the stable, up-to-date release version, see RBGL.

An interface to the BOOST graph library


Bioconductor version: 3.10

A fairly extensive and comprehensive interface to the graph algorithms contained in the BOOST library.

Author: Vince Carey <stvjc at channing.harvard.edu>, Li Long <li.long at isb-sib.ch>, R. Gentleman

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("RBGL")):

Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("RBGL")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RBGL")
RBGL Overview PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews GraphAndNetwork, Network, Software
Version 1.62.1
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 19 years)
License Artistic-2.0
Depends graph, methods
Imports methods
System Requirements
URL http://www.bioconductor.org
See More
Suggests Rgraphviz, XML, RUnit, BiocGenerics
Linking To BH
Enhances
Depends On Me apComplex, BioNet, CellNOptR, joda, pkgDepTools, RpsiXML
Imports Me alpine, BiocPkgTools, biocViews, CAMERA, Category, ChIPpeakAnno, CHRONOS, clipper, CytoML, DEGraph, DEsubs, EventPointer, flowWorkspace, GAPGOM, GeneAnswers, GOSim, GOstats, MIGSA, NCIgraph, nem, openCyto, OrganismDbi, pkgDepTools, predictionet, RDAVIDWebService, signet, Streamer, ToPASeq, VariantFiltering
Suggests Me BiocCaseStudies, DEGraph, GeneNetworkBuilder, graph, gwascat, KEGGgraph, keggorthology, rBiopaxParser, VariantTools, yeastExpData
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package RBGL_1.62.1.tar.gz
Windows Binary RBGL_1.62.1.zip
Mac OS X 10.11 (El Capitan) RBGL_1.62.1.tgz
Source Repository git clone https://git.bioconductor.org/packages/RBGL
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/RBGL
Bioc Package Browser https://code.bioconductor.org/browse/RBGL/
Package Short Url https://bioconductor.org/packages/RBGL/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.10 Source Archive