## ----include = FALSE---------------------------------------------------------- knitr::opts_chunk$set( collapse = TRUE, comment = "#>" ) ## ----setup, eval=FALSE-------------------------------------------------------- # library(mammalcol) ## ----example1, eval=FALSE, echo=TRUE------------------------------------------ # # define a vector with species to search for # splist <- c("Tapirus bairdii", "Tapirus pinchaque", "Tapirus terrestris", # "Tapirus terrestris", "Pudu mephistophiles", "Tapirus bairdii") # # # search in database # search_mammalcol(splist) # ## ----example2, eval=FALSE, echo=TRUE------------------------------------------ # # vector with species names and intentional typos # splist <- c("Tapiru terrestre", "pudu mephistophiles", "tapirus bairdii") # # # search in database # search_mammalcol(splist) ## ----example3, eval=FALSE, echo=TRUE------------------------------------------ # # write a species name in the function to map it # mammalmap("Tapirus pinchaque") ## ----eval=FALSE--------------------------------------------------------------- # occ.any <- sp_by_depto(c("Arauca", "Norte de Santander"), type = "any") # head(occ.any) # ## ----eval=FALSE--------------------------------------------------------------- # occ.only <- sp_by_depto(c("Norte de Santander"), type = "only") # head(occ.only) ## ----eval=FALSE--------------------------------------------------------------- # occ.all <- sp_by_depto(c("Arauca", "Norte de Santander"), type = "all") # occ.bats <- sp_by_depto(c("Arauca", "Norte de Santander"), type = "all", taxa = "Chiroptera") # head(occ.bats) # ## ----eval=FALSE--------------------------------------------------------------- # citation("mammalcol") #