LocaTT: Geographically-Conscious Taxonomic Assignment for Metabarcoding

A bioinformatics pipeline for performing taxonomic assignment of DNA metabarcoding sequence data while considering geographic location. A detailed tutorial is available at <https://urodelan.github.io/Local_Taxa_Tool_Tutorial/>. A manuscript describing these methods is in preparation.

Version:	1.1.1
Imports:	utils, stats, taxize
Published:	2023-10-30
Author:	Kenen Goodwin [aut, cre], Taal Levi [aut]
Maintainer:	Kenen Goodwin <urodelan at gmail.com>
BugReports:	https://github.com/Urodelan/LocaTT/issues
License:	GPL (≥ 3)
URL:	https://github.com/Urodelan/LocaTT
NeedsCompilation:	no
Citation:	LocaTT citation info
Materials:	README
CRAN checks:	LocaTT results

Documentation:

Reference manual:

LocaTT.pdf

Downloads:

Package source:	LocaTT_1.1.1.tar.gz
Windows binaries:	r-devel: LocaTT_1.1.1.zip, r-release: LocaTT_1.1.1.zip, r-oldrel: LocaTT_1.1.1.zip
macOS binaries:	r-release (arm64): LocaTT_1.1.1.tgz, r-oldrel (arm64): LocaTT_1.1.1.tgz, r-release (x86_64): LocaTT_1.1.1.tgz, r-oldrel (x86_64): LocaTT_1.1.1.tgz

Linking:

Please use the canonical form https://CRAN.R-project.org/package=LocaTT to link to this page.