Last updated on 2026-02-11 10:37:07 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.2.8 | OK | ||||
| r-devel-linux-x86_64-debian-gcc | 0.2.8 | 10.51 | 213.45 | 223.96 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.2.8 | 26.00 | 556.37 | 582.37 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 0.2.8 | 25.00 | 550.31 | 575.31 | OK | |
| r-devel-macos-arm64 | 0.2.8 | 4.00 | 37.00 | 41.00 | ERROR | |
| r-devel-windows-x86_64 | 0.2.8 | 24.00 | 384.00 | 408.00 | OK | |
| r-patched-linux-x86_64 | 0.2.8 | 18.83 | 316.01 | 334.84 | OK | |
| r-release-linux-x86_64 | 0.2.8 | 14.71 | 315.20 | 329.91 | OK | |
| r-release-macos-arm64 | 0.2.8 | OK | ||||
| r-release-macos-x86_64 | 0.2.8 | 10.00 | 376.00 | 386.00 | OK | |
| r-release-windows-x86_64 | 0.2.8 | 22.00 | 367.00 | 389.00 | OK | |
| r-oldrel-macos-arm64 | 0.2.8 | NOTE | ||||
| r-oldrel-macos-x86_64 | 0.2.8 | 10.00 | 375.00 | 385.00 | NOTE | |
| r-oldrel-windows-x86_64 | 0.2.8 | 29.00 | 506.00 | 535.00 | NOTE |
Version: 0.2.8
Check: examples
Result: ERROR
Running examples in ‘SeaSondeR-Ex.R’ failed
The error most likely occurred in:
> ### Name: seasonder_MUSICLonLat
> ### Title: Map MUSIC Bearings to Geographic Coordinates
> ### Aliases: seasonder_MUSICLonLat seasonder_MUSIC_LonLat
>
> ### ** Examples
>
> # Create a SeaSondeRCS object for MUSIC example
> cs_file <- system.file("css_data/CSS_TORA_24_04_04_0700.cs", package = "SeaSondeR")
> apm_file <- system.file("css_data/MeasPattern.txt", package = "SeaSondeR")
> apm_obj <- seasonder_readSeaSondeRAPMFile(apm_file)
seasonder_createSeaSondeRAPM: APM object created successfully.
> cs_obj <- seasonder_createSeaSondeRCS(cs_file, seasonder_apm_object = apm_obj)
new_SeaSondeRCS: SeaSondeRCS object created successfully.
> cs_obj <- seasonder_initMUSICData(
+ cs_obj,
+ range_cells = c(rep(5,11), rep(4,11)),
+ doppler_bins = c(c(669:679),c(674:684))
+ )
> cs_obj <- seasonder_runMUSIC(cs_obj)
seasonder_runMUSIC: MUSIC algorithm started.
*** caught segfault ***
address 0x1, cause 'invalid permissions'
Traceback:
1: eigen(C, symmetric = TRUE)
2: .f(.x[[i]], ...)
3: .Primitive(".Call")(list(name = "map_impl", address = <pointer: 0x6000034d59e0>, dll = list(name = "purrr", path = "/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/purrr/libs/purrr.so", dynamicLookup = FALSE, handle = <pointer: 0x720b29c0>, info = <pointer: 0x6000010d88a0>, forceSymbols = FALSE), numParameters = 6L), <environment>, "list", FALSE, 14L, NULL, 1L)
4: call_with_cleanup(map_impl, environment(), .type, .progress, n, names, i)
5: withCallingHandlers(expr, error = function(cnd) { if (i == 0L) { } else { message <- c(i = "In index: {i}.") if (!is.null(names) && !is.na(names[[i]]) && names[[i]] != "") { name <- names[[i]] message <- c(message, i = "With name: {name}.") } else { name <- NULL } cli::cli_abort(message, location = i, name = name, parent = cnd, call = error_call, class = "purrr_error_indexed") }})
6: with_indexed_errors(i = i, names = names, error_call = .purrr_error_call, call_with_cleanup(map_impl, environment(), .type, .progress, n, names, i))
7: map_("list", .x, .f, ..., .progress = .progress)
8: purrr::map(cov, seasonder_eigen_decomp_C)
9: .Call(dplyr_mask_eval_all_mutate, quo, private)
10: eval()
11: mask$eval_all_mutate(quo)
12: mutate_col(dots[[i]], data, mask, new_columns)
13: withCallingHandlers(for (i in seq_along(dots)) { poke_error_context(dots, i, mask = mask) context_poke("column", old_current_column) new_columns <- mutate_col(dots[[i]], data, mask, new_columns)}, error = dplyr_error_handler(dots = dots, mask = mask, bullets = mutate_bullets, error_call = error_call, error_class = "dplyr:::mutate_error"), warning = dplyr_warning_handler(state = warnings_state, mask = mask, error_call = error_call))
14: mutate_cols(.data, dplyr_quosures(...), by)
15: mutate.data.frame(., eigen = purrr::map(cov, seasonder_eigen_decomp_C))
16: dplyr::mutate(., eigen = purrr::map(cov, seasonder_eigen_decomp_C))
17: MUSIC %<>% dplyr::mutate(eigen = purrr::map(cov, seasonder_eigen_decomp_C))
18: seasonder_MUSICCovDecomposition(.)
19: out %<>% seasonder_MUSICCovDecomposition()
20: seasonder_runMUSIC(cs_obj)
An irrecoverable exception occurred. R is aborting now ...
Flavor: r-devel-macos-arm64
Version: 0.2.8
Check: tests
Result: ERROR
Running ‘testthat.R’ [3s/3s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(SeaSondeR)
>
> test_check("SeaSondeR")
Attaching package: 'magrittr'
The following objects are masked from 'package:testthat':
equals, is_less_than, not
*** caught segfault ***
address 0x1, cause 'invalid permissions'
Traceback:
1: eigen(C, symmetric = TRUE)
2: .f(.x[[i]], ...)
3: .Primitive(".Call")(list(name = "map_impl", address = <pointer: 0x6000019cd2e0>, dll = list(name = "purrr", path = "/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/purrr/libs/purrr.so", dynamicLookup = FALSE, handle = <pointer: 0x720b2e40>, info = <pointer: 0x600003de07e0>, forceSymbols = FALSE), numParameters = 6L), <environment>, "list", FALSE, 4608L, NULL, 1L)
4: call_with_cleanup(map_impl, environment(), .type, .progress, n, names, i)
5: withCallingHandlers(expr, error = function(cnd) { if (i == 0L) { } else { message <- c(i = "In index: {i}.") if (!is.null(names) && !is.na(names[[i]]) && names[[i]] != "") { name <- names[[i]] message <- c(message, i = "With name: {name}.") } else { name <- NULL } cli::cli_abort(message, location = i, name = name, parent = cnd, call = error_call, class = "purrr_error_indexed") }})
6: with_indexed_errors(i = i, names = names, error_call = .purrr_error_call, call_with_cleanup(map_impl, environment(), .type, .progress, n, names, i))
7: map_("list", .x, .f, ..., .progress = .progress)
8: purrr::map(cov, seasonder_eigen_decomp_C)
9: .Call(dplyr_mask_eval_all_mutate, quo, private)
10: eval()
11: mask$eval_all_mutate(quo)
12: mutate_col(dots[[i]], data, mask, new_columns)
13: withCallingHandlers(for (i in seq_along(dots)) { poke_error_context(dots, i, mask = mask) context_poke("column", old_current_column) new_columns <- mutate_col(dots[[i]], data, mask, new_columns)}, error = dplyr_error_handler(dots = dots, mask = mask, bullets = mutate_bullets, error_call = error_call, error_class = "dplyr:::mutate_error"), warning = dplyr_warning_handler(state = warnings_state, mask = mask, error_call = error_call))
14: mutate_cols(.data, dplyr_quosures(...), by)
15: mutate.data.frame(., eigen = purrr::map(cov, seasonder_eigen_decomp_C))
16: dplyr::mutate(., eigen = purrr::map(cov, seasonder_eigen_decomp_C))
17: MUSIC %<>% dplyr::mutate(eigen = purrr::map(cov, seasonder_eigen_decomp_C))
18: seasonder_MUSICCovDecomposition(.)
19: out %<>% seasonder_MUSICCovDecomposition()
20: seasonder_runMUSIC(.)
21: out %<>% seasonder_runMUSIC()
22: seasonder_runMUSICInFOR(seasonder_cs_obj)
23: eval(code, test_env)
24: eval(code, test_env)
25: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
26: doTryCatch(return(expr), name, parentenv, handler)
27: tryCatchOne(expr, names, parentenv, handlers[[1L]])
28: tryCatchList(expr, classes, parentenv, handlers)
29: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
30: doWithOneRestart(return(expr), restart)
31: withOneRestart(expr, restarts[[1L]])
32: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
33: test_code(code, parent.frame())
34: test_that("El fichero exportado coincide con el fichero de referencia", { CS_file_path <- system.file("css_data/CSS_TORA_24_04_04_0700.cs", package = "SeaSondeR") APM_path <- system.file("css_data/MeasPattern.txt", package = "SeaSondeR") seasonder_disableMessages() seasonder_apm_obj <- seasonder_readSeaSondeRAPMFile(APM_path) seasonder_cs_obj <- seasonder_createSeaSondeRCS(CS_file_path, seasonder_apm_object = seasonder_apm_obj) first_order_settings <- list(nsm = 2, fdown = 10^(10/10), flim = 10^(20/10), noisefact = 10^(6/10), currmax = 2, reject_distant_bragg = TRUE, reject_noise_ionospheric = FALSE, reject_noise_ionospheric_threshold = 0) seasonder_cs_obj <- seasonder_computeFORs(seasonder_cs_obj, FOR_control = first_order_settings) MUSIC_options <- list(doppler_interpolation = 2, smoothNoiseLevel = TRUE, PPMIN = 5, PWMAX = 50) seasonder_cs_obj <- seasonder_setMUSICOptions(seasonder_cs_obj, MUSIC_options) seasonder_cs_obj <- seasonder_runMUSICInFOR(seasonder_cs_obj) lluv_temp_path <- tempfile(pattern = "CSS_TORA_24_04_04_0700", fileext = ".ruv") AngSeg <- purrr::list_c(lapply(45:61, function(i) list(c(i, 313, 360), c(i, 0, 31)))) seasonder_exportLLUVRadialMetrics(seasonder_cs_obj, LLUV_path = lluv_temp_path, AngSeg = AngSeg) expected_metrics_text <- readLines(system.file("css_data/CSS_TORA_24_04_04_0700.ruv", package = "SeaSondeR")) radial_metrics_text <- readLines(lluv_temp_path) filter_text <- function(txt) { txt[!grepl("^%ProcessedTimeStamp", txt)] } expected_metrics_text <- filter_text(expected_metrics_text) radial_metrics_text <- filter_text(radial_metrics_text) expect_equal(radial_metrics_text, expected_metrics_text) })
35: eval(code, test_env)
36: eval(code, test_env)
37: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
38: doTryCatch(return(expr), name, parentenv, handler)
39: tryCatchOne(expr, names, parentenv, handlers[[1L]])
40: tryCatchList(expr, classes, parentenv, handlers)
41: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
42: doWithOneRestart(return(expr), restart)
43: withOneRestart(expr, restarts[[1L]])
44: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
45: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
46: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
47: FUN(X[[i]], ...)
48: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
49: doTryCatch(return(expr), name, parentenv, handler)
50: tryCatchOne(expr, names, parentenv, handlers[[1L]])
51: tryCatchList(expr, classes, parentenv, handlers)
52: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
53: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
54: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
55: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
56: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
57: test_check("SeaSondeR")
An irrecoverable exception occurred. R is aborting now ...
Flavor: r-devel-macos-arm64
Version: 0.2.8
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
sh: line 1: 92937 Segmentation fault: 11 '/Library/Frameworks/R.framework/Resources/bin/R' --vanilla --no-echo > '/Volumes/Temp/tmp/Rtmp12xJJL/file169f33ebe22c0' 2>&1 < '/Volumes/Temp/tmp/Rtmp12xJJL/file169f334db8b6e'
--- re-building ‘RadialMetricsExport.Rmd’ using rmarkdown
*** caught segfault ***
address 0x1, cause 'invalid permissions'
Traceback:
1: eigen(C, symmetric = TRUE)
2: .f(.x[[i]], ...)
3: .Primitive(".Call")(list(name = "map_impl", address = <pointer: 0x6000021a4aa0>, dll = list(name = "purrr", path = "/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/purrr/libs/purrr.so", dynamicLookup = FALSE, handle = <pointer: 0x720ac200>, info = <pointer: 0x6000005811a0>, forceSymbols = FALSE), numParameters = 6L), <environment>, "list", FALSE, 2318L, NULL, 1L)
4: call_with_cleanup(map_impl, environment(), .type, .progress, n, names, i)
5: withCallingHandlers(expr, error = function(cnd) { if (i == 0L) { } else { message <- c(i = "In index: {i}.") if (!is.null(names) && !is.na(names[[i]]) && names[[i]] != "") { name <- names[[i]] message <- c(message, i = "With name: {name}.") } else { name <- NULL } cli::cli_abort(message, location = i, name = name, parent = cnd, call = error_call, class = "purrr_error_indexed") }})
6: with_indexed_errors(i = i, names = names, error_call = .purrr_error_call, call_with_cleanup(map_impl, environment(), .type, .progress, n, names, i))
7: map_("list", .x, .f, ..., .progress = .progress)
8: purrr::map(cov, seasonder_eigen_decomp_C)
9: .Call(dplyr_mask_eval_all_mutate, quo, private)
10: eval()
11: mask$eval_all_mutate(quo)
12: mutate_col(dots[[i]], data, mask, new_columns)
13: withCallingHandlers(for (i in seq_along(dots)) { poke_error_context(dots, i, mask = mask) context_poke("column", old_current_column) new_columns <- mutate_col(dots[[i]], data, mask, new_columns)}, error = dplyr_error_handler(dots = dots, mask = mask, bullets = mutate_bullets, error_call = error_call, error_class = "dplyr:::mutate_error"), warning = dplyr_warning_handler(state = warnings_state, mask = mask, error_call = error_call))
14: mutate_cols(.data, dplyr_quosures(...), by)
15: mutate.data.frame(., eigen = purrr::map(cov, seasonder_eigen_decomp_C))
16: dplyr::mutate(., eigen = purrr::map(cov, seasonder_eigen_decomp_C))
17: MUSIC %<>% dplyr::mutate(eigen = purrr::map(cov, seasonder_eigen_decomp_C))
18: seasonder_MUSICCovDecomposition(.)
19: out %<>% seasonder_MUSICCovDecomposition()
20: seasonder_runMUSIC(.)
21: out %<>% seasonder_runMUSIC()
22: seasonder_runMUSICInFOR(cs_obj)
23: eval(expr, envir)
24: eval(expr, envir)
25: withVisible(eval(expr, envir))
26: withCallingHandlers(code, message = function (cnd) { watcher$capture_plot_and_output() if (on_message$capture) { watcher$push(cnd) } if (on_message$silence) { invokeRestart("muffleMessage") }}, warning = function (cnd) { if (getOption("warn") >= 2 || getOption("warn") < 0) { return() } watcher$capture_plot_and_output() if (on_warning$capture) { cnd <- sanitize_call(cnd) watcher$push(cnd) } if (on_warning$silence) { invokeRestart("muffleWarning") }}, error = function (cnd) { watcher$capture_plot_and_output() cnd <- sanitize_call(cnd) watcher$push(cnd) switch(on_error, continue = invokeRestart("eval_continue"), stop = invokeRestart("eval_stop"), error = NULL)})
27: eval(call)
28: eval(call)
29: with_handlers({ for (expr in tle$exprs) { ev <- withVisible(eval(expr, envir)) watcher$capture_plot_and_output() watcher$print_value(ev$value, ev$visible, envir) } TRUE}, handlers)
30: doWithOneRestart(return(expr), restart)
31: withOneRestart(expr, restarts[[1L]])
32: withRestartList(expr, restarts[-nr])
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(withRestartList(expr, restarts[-nr]), restarts[[nr]])
35: withRestartList(expr, restarts)
36: withRestarts(with_handlers({ for (expr in tle$exprs) { ev <- withVisible(eval(expr, envir)) watcher$capture_plot_and_output() watcher$print_value(ev$value, ev$visible, envir) } TRUE}, handlers), eval_continue = function() TRUE, eval_stop = function() FALSE)
37: evaluate::evaluate(...)
38: evaluate(code, envir = env, new_device = FALSE, keep_warning = if (is.numeric(options$warning)) TRUE else options$warning, keep_message = if (is.numeric(options$message)) TRUE else options$message, stop_on_error = if (is.numeric(options$error)) options$error else { if (options$error && options$include) 0L else 2L }, output_handler = knit_handlers(options$render, options))
39: in_dir(input_dir(), expr)
40: in_input_dir(evaluate(code, envir = env, new_device = FALSE, keep_warning = if (is.numeric(options$warning)) TRUE else options$warning, keep_message = if (is.numeric(options$message)) TRUE else options$message, stop_on_error = if (is.numeric(options$error)) options$error else { if (options$error && options$include) 0L else 2L }, output_handler = knit_handlers(options$render, options)))
41: eng_r(options)
42: block_exec(params)
43: call_block(x)
44: process_group(group)
45: withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (xfun::pkg_available("rlang", "1.0.0")) { if (is_R_CMD_build() || is_R_CMD_check()) { cnd = tryCatch(rlang::entrace(e), error = identity) error <<- format(cnd) } else { rlang::entrace(e) } } })
46: xfun:::handle_error(withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (xfun::pkg_available("rlang", "1.0.0")) { if (is_R_CMD_build() || is_R_CMD_check()) { cnd = tryCatch(rlang::entrace(e), error = identity) error <<- format(cnd) } else { rlang::entrace(e) } } }), function(loc) { setwd(wd) write_utf8(res, output %n% stdout()) paste0("\nQuitting from ", loc, if (!is.null(error)) paste0("\n", rule(), error, "\n", rule()))}, if (labels[i] != "") sprintf(" [%s]", labels[i]), get_loc)
47: process_file(text, output)
48: knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
49: rmarkdown::render(file, encoding = encoding, quiet = quiet, envir = globalenv(), output_dir = getwd(), ...)
50: vweave_rmarkdown(...)
51: engine$weave(file, quiet = quiet, encoding = enc)
52: doTryCatch(return(expr), name, parentenv, handler)
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])
54: tryCatchList(expr, classes, parentenv, handlers)
55: tryCatch({ engine$weave(file, quiet = quiet, encoding = enc) setwd(startdir) output <- find_vignette_product(name, by = "weave", engine = engine) if (!have.makefile && vignette_is_tex(output)) { texi2pdf(file = output, clean = FALSE, quiet = quiet) output <- find_vignette_product(name, by = "texi2pdf", engine = engine) }}, error = function(e) { OK <<- FALSE message(gettextf("Error: processing vignette '%s' failed with diagnostics:\n%s", file, conditionMessage(e)))})
56: tools:::.buildOneVignette("RadialMetricsExport.Rmd", "/Volumes/Builds/packages/sonoma-arm64/results/4.6/SeaSondeR.Rcheck/vign_test/SeaSondeR", TRUE, FALSE, "RadialMetricsExport", "UTF-8", "/Volumes/Temp/tmp/Rtmp12xJJL/file169f3155403b0.rds")
An irrecoverable exception occurred. R is aborting now ...
--- re-building ‘SeaSondeAPM.Rmd’ using rmarkdown
--- finished re-building ‘SeaSondeAPM.Rmd’
--- re-building ‘SeaSondeCS.Rmd’ using rmarkdown
--- finished re-building ‘SeaSondeCS.Rmd’
--- re-building ‘intro.Rmd’ using rmarkdown
--- finished re-building ‘intro.Rmd’
SUMMARY: processing the following file failed:
‘RadialMetricsExport.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-macos-arm64
Version: 0.2.8
Check: installed package size
Result: NOTE
installed size is 10.1Mb
sub-directories of 1Mb or more:
css_data 8.7Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64