Last updated on 2026-03-09 10:50:37 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.39 | 0.32 | 2.75 | 3.07 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.1.39 | 38.28 | 254.58 | 292.86 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.1.39 | 100.00 | 540.53 | 640.53 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 0.1.39 | 100.00 | 597.86 | 697.86 | OK | |
| r-devel-macos-arm64 | 0.1.39 | 15.00 | 103.00 | 118.00 | OK | |
| r-devel-windows-x86_64 | 0.1.39 | 57.00 | 317.00 | 374.00 | OK | |
| r-patched-linux-x86_64 | 0.1.39 | 45.57 | 347.28 | 392.85 | OK | |
| r-release-linux-x86_64 | 0.1.39 | 46.88 | 345.93 | 392.81 | OK | |
| r-release-macos-arm64 | 0.1.39 | 14.00 | 92.00 | 106.00 | ERROR | |
| r-release-macos-x86_64 | 0.1.39 | 38.00 | 303.00 | 341.00 | ERROR | |
| r-release-windows-x86_64 | 0.1.39 | 57.00 | 309.00 | 366.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.39 | 14.00 | 89.00 | 103.00 | ERROR | |
| r-oldrel-macos-x86_64 | 0.1.39 | 40.00 | 320.00 | 360.00 | ERROR | |
| r-oldrel-windows-x86_64 | 0.1.39 | 72.00 | 429.00 | 501.00 | NOTE |
Version: 0.1.39
Check: package dependencies
Result: ERROR
Packages required but not available: 'AnnotationDbi', 'GenomicFeatures'
Packages suggested but not available for checking:
'biomaRt', 'TxDb.Hsapiens.UCSC.hg38.knownGene',
'TxDb.Mmusculus.UCSC.mm10.knownGene', 'org.Mm.eg.db', 'org.Hs.eg.db'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.1.39
Check: examples
Result: ERROR
Running examples in ‘HiCociety-Ex.R’ failed
The error most likely occurred in:
> ### Name: add_Genes
> ### Title: Add gene information
> ### Aliases: add_Genes
>
> ### ** Examples
>
> modulefile = system.file('extdata','mouse_naiveCD4T_Vahedi_short.rds',
+ package = 'HiCocietyExample')
> mycom = readRDS(modulefile)
> mycom$ModuleSummary = add_Genes(mycom$ModuleSummary,
+ 'TxDb.Mmusculus.UCSC.mm10.knownGene')
Error in add_Genes(mycom$ModuleSummary, "TxDb.Mmusculus.UCSC.mm10.knownGene") :
Package TxDb.Mmusculus.UCSC.mm10.knownGene not found
Execution halted
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 0.1.39
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking:
'TxDb.Hsapiens.UCSC.hg38.knownGene',
'TxDb.Mmusculus.UCSC.mm10.knownGene', 'org.Mm.eg.db'
Flavor: r-oldrel-macos-arm64
Version: 0.1.39
Check: installed package size
Result: NOTE
installed size is 6.6Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 0.1.39
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking:
'TxDb.Hsapiens.UCSC.hg38.knownGene',
'TxDb.Mmusculus.UCSC.mm10.knownGene'
Flavor: r-oldrel-macos-x86_64