# Generated by roxygen2: do not edit by hand

S3method(plot,fancy)
export(bootstrap_networks)
export(clean_sample_names)
export(clr_normalize)
export(export_cytoscape)
export(fancy)
export(filter_mags)
export(find_optimal_k)
export(hybrid_score)
export(parse_count_tables)
export(parse_gtdb_taxonomy)
export(phyla_palette)
export(plot_k_elbow)
export(plot_network)
export(threshold_edges)
importFrom(compositions,clr)
importFrom(dplyr,across)
importFrom(dplyr,arrange)
importFrom(dplyr,desc)
importFrom(dplyr,filter)
importFrom(dplyr,full_join)
importFrom(dplyr,group_by)
importFrom(dplyr,if_else)
importFrom(dplyr,mutate)
importFrom(dplyr,n)
importFrom(dplyr,select)
importFrom(dplyr,summarise)
importFrom(energy,dcor)
importFrom(graphics,abline)
importFrom(graphics,hist)
importFrom(graphics,legend)
importFrom(graphics,par)
importFrom(graphics,plot)
importFrom(graphics,points)
importFrom(graphics,text)
importFrom(knnmi,mutual_inf_cc)
importFrom(minet,mrnet)
importFrom(purrr,map)
importFrom(purrr,reduce)
importFrom(readr,read_tsv)
importFrom(rlang,.data)
importFrom(snowfall,sfClusterApplyLB)
importFrom(snowfall,sfCpus)
importFrom(snowfall,sfExport)
importFrom(snowfall,sfInit)
importFrom(snowfall,sfLibrary)
importFrom(snowfall,sfStop)
importFrom(stats,quantile)
importFrom(stats,sd)
importFrom(stringr,str_remove)
importFrom(stringr,str_remove_all)
importFrom(tibble,column_to_rownames)
importFrom(tibble,rownames_to_column)
importFrom(tidyr,separate)
importFrom(utils,read.csv)
