Package: Fancy
Type: Package
Title: Frequency and Nonlinear Correlation Hybrid Network Inference
Version: 0.99.0
Authors@R: person(
    given = "Wanxin",
    family = "Lai",
    role = c("aut", "cre"),
    email = "wanxin.graceca@gmail.com",
    comment = c(ORCID = "0009-0000-1607-2453"))
URL: https://github.com/wala-github/Fancy
BugReports: https://github.com/wala-github/Fancy/issues
Description: Infers microbial co-abundance networks by combining mutual
    information (via MRNET) and distance correlation into a single hybrid
    edge score. Bootstrap resampling provides frequency-based confidence,
    and a weighted scoring function ranks edges for downstream module
    analysis. Designed for metagenome-assembled genome (MAG) count tables.
License: GPL (>= 3)
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3
Depends: R (>= 4.5.0)
Imports: minet, compositions, energy, knnmi, snowfall, dplyr, tidyr,
        purrr, readr, rlang, tibble, stringr, graphics, stats, utils
Suggests: BiocStyle, knitr, rmarkdown, testthat (>= 3.0.0), ggplot2,
        igraph, magick
biocViews: NetworkInference, Network, Metagenomics, Microbiome,
        StatisticalMethod
VignetteBuilder: knitr
Config/testthat/edition: 3
NeedsCompilation: no
Packaged: 2026-05-26 16:59:42 UTC; pkgbuild
Author: Wanxin Lai [aut, cre] (ORCID: <https://orcid.org/0009-0000-1607-2453>)
Maintainer: Wanxin Lai <wanxin.graceca@gmail.com>
