ENVISIONQuery

This package is for version 3.12 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see ENVISIONQuery.

Retrieval from the ENVISION bioinformatics data portal into R

Bioconductor version: 3.12

Tools to retrieve data from ENVISION, the Database for Annotation, Visualization and Integrated Discovery portal

Author: Alex Lisovich, Roger Day

Maintainer: Alex Lisovich <all67 at pitt.edu>, Roger Day <day01 at pitt.edu>

Citation (from within R, enter citation("ENVISIONQuery")):

Installation

To install this package, start R (version "4.0") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ENVISIONQuery")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ENVISIONQuery")

An R Package for retrieving data from EnVision into R objects.	PDF	R Script
Reference Manual	PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	Annotation, Software
Version	1.38.0
In Bioconductor since	BioC 2.8 (R-2.13) (13 years)
License	GPL-2
Depends	rJava, XML, utils
Imports
System Requirements
URL

Suggests
Linking To
Enhances
Depends On Me
Imports Me
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Build Report	Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	ENVISIONQuery_1.38.0.tar.gz
Windows Binary	ENVISIONQuery_1.38.0.zip
macOS 10.13 (High Sierra)
Source Repository	git clone https://git.bioconductor.org/packages/ENVISIONQuery
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/ENVISIONQuery
Bioc Package Browser	https://code.bioconductor.org/browse/ENVISIONQuery/
Package Short Url	https://bioconductor.org/packages/ENVISIONQuery/
Package Downloads Report	Download Stats
Old Source Packages for BioC 3.12	Source Archive