Bioconductor version: 2.6
Automated pipline to perform gene expression analysis for Applied Biosystems Genome Survey Microarray (AB1700) data format. Functions include data preprocessing, filtering, control probe analysis, statistical analysis in one single function. A GUI interface is also provided. The raw data, processed data, graphics output and statistical results are organized into folders according to the analysis settings used.
Author: Yongming Andrew Sun
Maintainer: Yongming Andrew Sun
To install this package, start R and enter:
source("http:///biocLite.R") biocLite("ABarray")
R Script | ABarray gene expression | |
R Script | ABarray gene expression GUI interface |
biocViews | Microarray, OneChannel, Preprocessing |
Depends | Biobase, multtest, tcltk |
Imports | |
Suggests | limma, LPE |
System Requirements | |
License | GPL |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Version | 1.16.0 |
Package Source | ABarray_1.16.0.tar.gz |
Windows Binary | ABarray_1.16.0.zip (32- & 64-bit) |
MacOS 10.5 (Leopard) binary | ABarray_1.16.0.tgz |
Package Downloads Report | Download Stats |
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